RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ZNF699Q32M78 642 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 KRT71Q3SY84 523 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 ZNF484Q5JVG2 852 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 DENND2CQ68D51 928 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 GPAT2Q6NUI2 795 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 EFCAB12Q6NXP0 572 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 TTC27Q6P3X3 843 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 CCDC62Q6P9F0 684 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 ZDHHC24Q6UX98 284 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 THNSL1Q8IYQ7 743 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 UBR7Q8N806 425 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 OR2W6PQ8NHA6 318 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 FEZF2Q8TBJ5 459 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 GRK7Q8WTQ7 553 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 ZC3H15Q8WU90 426 aaKnown RBP11.1□□□□□ -0.63
CPNE1-218ENST00000439806 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 LRRC19Q9H756 370 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 RPF1Q9H9Y2 349 aaKnown RBP11.1□□□□□ -0.63
CPNE1-218ENST00000439806 ZDHHC18Q9NUE0 388 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 IP6K2Q9UHH9 426 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 LCMT1Q9UIC8 334 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 USTQ9Y2C2 406 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 CEP83Q9Y592 693 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 NFS1Q9Y697 457 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 SCN4AP35499 1836 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ZBTB42B2RXF5 422 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ACKR2O00590 384 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TLR3O15455 904 aaKnown RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 GH1P01241 217 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 CFHP08603 1231 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 BRD2P25440 801 aaKnown RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 PHKA2P46019 1235 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 KCNJ1P48048 391 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 CLCN3P51790 818 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ZNF132P52740 706 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TNFAIP2Q03169 654 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 KRT17Q04695 432 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 PDCLQ13371 301 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 SNX1Q13596 522 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 KCTD19Q17RG1 926 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 SKIDA1Q1XH10 827 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 C2CD6Q53TS8 623 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 EAPPQ56P03 285 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ZFYVE27Q5T4F4 411 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TTC19Q6DKK2 380 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 PLEKHA7Q6IQ23 1121 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 LLGL2Q6P1M3 1020 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 SCARA5Q6ZMJ2 495 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TSHZ1Q6ZSZ6 1077 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 SYDE1Q6ZW31 735 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ARMCX2Q7L311 632 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 CROCCP2Q86T23 111 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TMEM35BQ8NCS4 154 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 C1orf54Q8WWF1 131 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ZNF606Q8WXB4 792 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ZNF668Q96K58 619 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 CCDC114Q96M63 670 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TRIM7Q9C029 511 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 DCLK3Q9C098 648 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 PARVAQ9NVD7 372 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 PRMT7Q9NVM4 692 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ERAP1Q9NZ08 941 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 GRHL1Q9NZI5 618 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 RSPH14Q9UHP6 348 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 PTPN22Q9Y2R2 807 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
CPNE1-218ENST00000439806 ABLIM1O14639 778 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 MAGEB2O15479 319 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 FAM189A1O60320 539 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 B4GALT4O60513 344 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 LSM8O95777 96 aaKnown RBP11.08□□□□□ -0.64
CPNE1-218ENST00000439806 GAS8O95995 478 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-218ENST00000439806 LGALS2P05162 132 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 KRT19P08727 400 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 HOXC6P09630 235 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 PROZP22891 400 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 HPDP32754 393 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-218ENST00000439806 OSTNP61366 133 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 IGBP1P78318 339 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 TAP1Q03518 808 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 MAMLD1Q13495 774 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 LAMC2Q13753 1193 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 SLMAPQ14BN4 828 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 LLGL1Q15334 1064 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 ODF2Q5BJF6 829 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 EEF1DP3Q658K8 133 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 DNAJC24Q6P3W2 148 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 KATNAL2Q8IYT4 538 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 FBXO25Q8TCJ0 367 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 SLCO2A1Q92959 643 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 SLC10A4Q96EP9 437 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 DDX27Q96GQ7 796 aaKnown RBP11.08□□□□□ -0.64
CPNE1-218ENST00000439806 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms