RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ANO5Q75V66 913 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 MON1BQ7L1V2 547 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ANKS1BQ7Z6G8 1248 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 PRUNE1Q86TP1 453 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 MCF2L2Q86YR7 1114 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 CPXCR1Q8N123 301 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 GPD1LQ8N335 351 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 KIF2BQ8N4N8 673 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ZNF516Q92618 1163 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 KLHL29Q96CT2 875 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 TRIM11Q96F44 468 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 PLCD4Q9BRC7 762 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 PICK1Q9NRD5 415 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 C1orf112Q9NSG2 853 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 WDR64B1ANS9 1081 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ZC3H11AO75152 810 aaKnown RBP eCLIP19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 CYP1A1P04798 512 aaPredicted RBP19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 FOXN2P32314 431 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 PGM5Q15124 567 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 C15orf39Q6ZRI6 1047 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 MOB2Q70IA6 237 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ZNF365Q70YC5 407 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ASRGL1Q7L266 308 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 USP37Q86T82 979 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 RELL1Q8IUW5 271 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ANKLE1Q8NAG6 615 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 CCHCR1Q8TD31 782 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ARHGEF3Q9NR81 526 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 NKIRAS1Q9NYS0 192 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 PCDHB2Q9Y5E7 798 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 A8MUI8 341 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 RPSAP08865 295 aaKnown RBP19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 FDX1P10109 184 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 MYCLP12524 364 aaPredicted RBP19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 TAC1P20366 129 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 JAK3P52333 1124 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 VGLL4Q14135 290 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 STAT4Q14765 748 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 MTFR1Q15390 333 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 RNF43Q68DV7 783 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 ZNF677Q86XU0 584 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 CCDC89Q8N998 374 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 BBOF1Q8ND07 529 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 SPIRE2Q8WWL2 714 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 CNKSR2Q8WXI2 1034 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 PRCCQ92733 491 aaPredicted RBP19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 FAM213AQ9BRX8 229 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 NTPCRQ9BSD7 190 aaKnown RBP19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 OSBPL8Q9BZF1 889 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 TRIM33Q9UPN9 1127 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 ACTL7BQ9Y614 415 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 DOCK5Q9H7D0 1870 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 KIAA1217Q5T5P2 1943 aa19.46■□□□□ 0.71
PCDHA1-202ENST00000394633 PSTPIP1O43586 416 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 CFHP08603 1231 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 NSFP46459 744 aaKnown RBP19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 MYO1EQ12965 1108 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 STRN3Q13033 797 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 ZNF280CQ8ND82 737 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 GINM1Q9NU53 330 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 KLRC2P26717 231 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 SFNP31947 248 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 HMGCS2P54868 508 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 BACE1P56817 501 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 LMBRD2Q68DH5 695 aaPredicted RBP19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 RHOT1Q8IXI2 618 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 MAML1Q92585 1016 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 LPAR1Q92633 364 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 CCDC77Q9BR77 488 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 TCEAL9Q9UHQ7 104 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 SNCAIPQ9Y6H5 919 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 PARP14Q460N5 1801 aa19.45■□□□□ 0.7
PCDHA1-202ENST00000394633 WDR46O15213 610 aaKnown RBP19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 ANP32DO95626 131 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 CD58P19256 250 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 DSG3P32926 999 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 MAGEA4P43358 317 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 WDR4P57081 412 aaKnown RBP19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 RPS6P62753 249 aaKnown RBP19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 KRT76Q01546 638 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 TMED2Q15363 201 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 PPP1R21Q6ZMI0 780 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 ECHDC2Q86YB7 292 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 KATNAL2Q8IYT4 538 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 SAMD3Q8N6K7 520 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 CDCA5Q96FF9 252 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 C11orf70Q9BRQ4 267 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 RASA4BC9J798 803 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 HGSO14964 777 aaPredicted RBP19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 HNRNPDLO14979 420 aaKnown RBP19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 RASA4O43374 803 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 GBP2P32456 591 aaPredicted RBP19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 GJC1P36383 396 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 CYP4F22Q6NT55 531 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 PASD1Q8IV76 773 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 NSMCE1Q8WV22 266 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 IFT74Q96LB3 600 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 RBM15Q96T37 977 aaKnown RBP eCLIP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms