RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TRPC3Q13507 836 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 ZFYVE27Q5T4F4 411 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 CDCA2Q69YH5 1023 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 PRUNE1Q86TP1 453 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 CISHQ9NSE2 258 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 NOVA2Q9UNW9 492 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 LGR5O75473 907 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 TMEM191BP0C7N4 346 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 TBXAS1P24557 533 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 ENPEPQ07075 957 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 PPP2R5EQ16537 467 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 ODF2Q5BJF6 829 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 CYP4A22Q5TCH4 519 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 ARMCX2Q7L311 632 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 WDR49Q8IV35 697 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 DDX27Q96GQ7 796 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 FAM81BQ96LP2 452 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 MPHOSPH6Q99547 160 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 MAF1Q9H063 256 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 EPB41L4BQ9H329 900 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 SEMA4AQ9H3S1 761 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 AVENQ9NQS1 362 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 CPSF3Q9UKF6 684 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 TLDC2A0PJX2 215 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 HOXC6P09630 235 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 POTEJP0CG39 1038 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 RALAP11233 206 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 HSPA6P17066 643 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 DUOXA2Q1HG44 320 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 LIN9Q5TKA1 542 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 TCP11Q8WWU5 503 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 TFAP2BQ92481 460 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.31
CNKSR1-202ENST00000374253 RNF25Q96BH1 459 aaPredicted RBP17■□□□□ 0.31
CNKSR1-202ENST00000374253 SYT17Q9BSW7 474 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 CWC15Q9P013 229 aaKnown RBP17■□□□□ 0.31
CNKSR1-202ENST00000374253 IGKV6-21A0A0C4DH24 114 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 PPFIA2O75334 1257 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 RPS6KA5O75582 802 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 PROSCO94903 275 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 IVLP07476 585 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 PMS2P54278 862 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 CDH8P55286 799 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 KRT17Q04695 432 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 MCL1Q07820 350 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 PTP4A2Q12974 167 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 MTMR3Q13615 1198 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 ZNF699Q32M78 642 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 LRIG3Q6UXM1 1119 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 PLPPR4Q7Z2D5 763 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 CPB2Q96IY4 423 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 CCDC114Q96M63 670 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 FAM107BQ9H098 131 aa17■□□□□ 0.31
CNKSR1-202ENST00000374253 MGAMO43451 1857 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 ECEL1O95672 775 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 VTNP04004 478 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 INSRRP14616 1297 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 SEC24CP53992 1094 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 SKOR1P84550 965 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 TTLL4Q14679 1199 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 KAZNQ674X7 775 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 MPZL3Q6UWV2 235 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 KDM7AQ6ZMT4 941 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 TXLNGYQ9BZA5 131 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 SMARCAD1Q9H4L7 1026 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 TJP2Q9UDY2 1190 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 HMGB1P1B2RPK0 211 aaPredicted RBP16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 PPFIA4O75335 1185 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 MYBL1P10243 752 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 MAGOHP61326 146 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 ADCY2Q08462 1091 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 SLC29A2Q14542 456 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 CLUL1Q15846 466 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 FASTKD5Q7L8L6 764 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 PWWP2AQ96N64 755 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 MCEEQ96PE7 176 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 NIF3L1Q9GZT8 377 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 ASIC3Q9UHC3 531 aa16.99■□□□□ 0.31
CNKSR1-202ENST00000374253 A0A087WZ62 844 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 GPR25O00155 361 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 FSCN2O14926 492 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 CAND2O75155 1236 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 ERLIN2O94905 339 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 NFICP08651 508 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 KRT10P13645 584 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 CD19P15391 556 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 SLCO1A2P46721 670 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 MBTD1Q05BQ5 628 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 CYP1B1Q16678 543 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 TRIM11Q96F44 468 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 FDXACB1Q9BRP7 624 aaPredicted RBP16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 CDT1Q9H211 546 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 ACKR2O00590 384 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 PODXLO00592 558 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 ADCYAP1R1P41586 468 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms