RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 SPAG6O75602 509 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 WEE2P0C1S8 567 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 RBP3P10745 1247 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 KIF19Q2TAC6 998 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 RBM46Q8TBY0 533 aaKnown RBP16.55■□□□□ 0.24
HDAC5-202ENST00000336057 RSAD1Q9HA92 442 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 LCP1P13796 627 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 GYS1P13807 737 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 RGS7P49802 495 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 SATB1Q01826 763 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 CUL2Q13617 745 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 THEM5Q8N1Q8 247 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 TRIML2Q8N7C3 387 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 PSTPIP1O43586 416 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 PTK7Q13308 1070 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 LONP2Q86WA8 852 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 CREG2Q8IUH2 290 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 TNIP3Q96KP6 325 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 CAND2O75155 1236 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 MYBPC2Q14324 1141 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 KIF2BQ8N4N8 673 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 ATG4AQ8WYN0 398 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 ATG4CQ96DT6 458 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 CCND1P24385 295 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 KDSRQ06136 332 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 LVRNQ6Q4G3 990 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 RFX8Q6ZV50 586 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 ZNF507Q8TCN5 953 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 AENQ8WTP8 325 aaKnown RBP16.54■□□□□ 0.24
HDAC5-202ENST00000336057 SMARCAD1Q9H4L7 1026 aa16.54■□□□□ 0.24
HDAC5-202ENST00000336057 MAP2K7O14733 419 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 PFDN1O60925 122 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 SHMT1P34896 483 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 TMEM132DQ14C87 1099 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 DNAAF5Q86Y56 855 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 SLC26A7Q8TE54 656 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 PAK5Q9P286 719 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 ZSCAN5CA6NGD5 496 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 DDTLA6NHG4 134 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 SMTNL2Q2TAL5 461 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 CAPRIN2Q6IMN6 1127 aaKnown RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 BTNL9Q6UXG8 535 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 PPIL6Q8IXY8 311 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 TTC8Q8TAM2 541 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 KLF6Q99612 283 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 TRIM15Q9C019 465 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 WHRNQ9P202 907 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 CNOT7Q9UIV1 285 aaKnown RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 GSTA4O15217 222 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 IL1RL1Q01638 556 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 POU5F1BQ06416 359 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 MORF4L2Q15014 288 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 SLC20A1Q8WUM9 679 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 MRPL40Q9NQ50 206 aaKnown RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 EIF4E1BA6NMX2 242 aaKnown RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 ZNF189O75820 626 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 IL18RAPO95256 599 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 ENO1P06733 434 aaKnown RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 BRD2P25440 801 aaKnown RBP16.53■□□□□ 0.24
HDAC5-202ENST00000336057 SUN2Q9UH99 717 aa16.53■□□□□ 0.24
HDAC5-202ENST00000336057 CES2O00748 559 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 ZC3H11AO75152 810 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDAC5-202ENST00000336057 NPTX2P47972 431 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 SERPINB9P50453 376 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 ALDH18A1P54886 795 aaKnown RBP16.52■□□□□ 0.24
HDAC5-202ENST00000336057 PTENP60484 403 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 HIC1Q14526 733 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 ATF7IP2Q5U623 682 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 C1orf131Q8NDD1 294 aaKnown RBP16.52■□□□□ 0.24
HDAC5-202ENST00000336057 SIK3Q9Y2K2 1263 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 IGF2BP3O00425 579 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDAC5-202ENST00000336057 ITGA4P13612 1032 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 CAP2P40123 477 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 YWHAHQ04917 246 aaPredicted RBP16.52■□□□□ 0.24
HDAC5-202ENST00000336057 STX3Q13277 289 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 SLC35C1Q96A29 364 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 LRFN2Q9ULH4 789 aa16.52■□□□□ 0.24
HDAC5-202ENST00000336057 A0A0U1RQJ8 604 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 SMIM22K7EJ46 135 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 AARSP49588 968 aaKnown RBP eCLIP16.52■□□□□ 0.23
HDAC5-202ENST00000336057 TSPY1Q01534 308 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 IER5Q5VY09 327 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 CNPY4Q8N129 248 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 MTMR9Q96QG7 549 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 MAGEB5Q9BZ81 275 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 TMX2Q9Y320 296 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 ORC6Q9Y5N6 252 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 RIMS1Q86UR5 1692 aaKnown RBP16.52■□□□□ 0.23
HDAC5-202ENST00000336057 MTM1Q13496 603 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 CCDC138Q96M89 665 aa16.52■□□□□ 0.23
HDAC5-202ENST00000336057 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.52■□□□□ 0.23
HDAC5-202ENST00000336057 ATP9BO43861 1147 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 SNRPAP09012 282 aaKnown RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 GEMIN4P57678 1058 aaKnown RBP16.51■□□□□ 0.23
HDAC5-202ENST00000336057 DNAJC3Q13217 504 aa16.51■□□□□ 0.23
HDAC5-202ENST00000336057 C11orf63Q6NUN7 778 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms