RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 STAT6P42226 847 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 ACOT2P49753 483 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 ALCAMQ13740 583 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 TMEM132DQ14C87 1099 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 USP37Q86T82 979 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 ZNF396Q96N95 335 aaPredicted RBP19.25■□□□□ 0.67
HDDC3-201ENST00000330334 RPP25Q9BUL9 199 aaKnown RBP19.25■□□□□ 0.67
HDDC3-201ENST00000330334 FOXD4L1Q9NU39 408 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 ADCY1Q08828 1119 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 GPR17Q13304 367 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 MYBPC2Q14324 1141 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 L1TD1Q5T7N2 865 aaKnown RBP19.24■□□□□ 0.67
HDDC3-201ENST00000330334 C9orf57Q5W0N0 161 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 DSTYKQ6XUX3 929 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 NT5DC4Q86YG4 428 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 LEMD2Q8NC56 503 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 GPR152Q8TDT2 470 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 FAM212AQ96EL1 285 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 ACCSQ96QU6 501 aa19.24■□□□□ 0.67
HDDC3-201ENST00000330334 A0A087X0B3 334 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 TISP43B9A030 160 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 SPTLC2O15270 562 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 PI15O43692 258 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 IL18RAPO95256 599 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 CYP11A1P05108 521 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 NFICP08651 508 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 GUCY2FP51841 1108 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 STK38Q15208 465 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 SLC5A9Q2M3M2 681 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 PRSS36Q5K4E3 855 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 IQCEQ6IPM2 695 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 CRELD2Q6UXH1 353 aaPredicted RBP19.23■□□□□ 0.67
HDDC3-201ENST00000330334 RNF19BQ6ZMZ0 732 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 CCDC105Q8IYK2 499 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 ELMOD1Q8N336 334 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 TMEM130Q8N3G9 435 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 POMGNT1Q8WZA1 660 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 ATOH1Q92858 354 aaPredicted RBP19.23■□□□□ 0.67
HDDC3-201ENST00000330334 SHDQ96IW2 340 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 SENP8Q96LD8 212 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 ZNF512Q96ME7 567 aaPredicted RBP19.23■□□□□ 0.67
HDDC3-201ENST00000330334 PANK2Q9BZ23 570 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 LRRC27Q9C0I9 530 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 CUEDC2Q9H467 287 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 ARHGEF3Q9NR81 526 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 HSFX1Q9UBD0 423 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 NOTCH4Q99466 2003 aa19.23■□□□□ 0.67
HDDC3-201ENST00000330334 USP34Q70CQ2 3546 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 PROB1E7EW31 1015 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 H0Y858 1186 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 ECI2O75521 394 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 YEATS4O95619 227 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 ODC1P11926 461 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 CPB1P15086 417 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 EPHA5P54756 1037 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 GPC5P78333 572 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 KCNA1Q09470 495 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 CYP4A22Q5TCH4 519 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 OVOS1Q6IE37 1185 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 PHOX2BQ99453 314 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 CORO1BQ9BR76 489 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 TNMDQ9H2S6 317 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 PANK4Q9NVE7 773 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 DSEQ9UL01 958 aa19.22■□□□□ 0.67
HDDC3-201ENST00000330334 TIMM13Q9Y5L4 95 aaPredicted RBP19.22■□□□□ 0.67
HDDC3-201ENST00000330334 PPEF2O14830 753 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 SPTLC1O15269 473 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 GCNT3O95395 438 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 LDHAP00338 332 aaKnown RBP19.21■□□□□ 0.67
HDDC3-201ENST00000330334 IDEP14735 1019 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 GARTP22102 1010 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 STARD6P59095 220 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 PFKPQ01813 784 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 CNNM4Q6P4Q7 775 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 DTWD2Q8NBA8 298 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 TMEM206Q9H813 350 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 TBC1D17Q9HA65 648 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 KBTBD4Q9NVX7 518 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 DPP3Q9NY33 737 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 CEP72Q9P209 647 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 CA14Q9ULX7 337 aa19.21■□□□□ 0.67
HDDC3-201ENST00000330334 ZFHX2Q9C0A1 2572 aaPredicted RBP19.21■□□□□ 0.67
HDDC3-201ENST00000330334 CUTAO60888 179 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 VNN2O95498 520 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 AMPD3Q01432 767 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 PRKCQQ04759 706 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 TWF1Q12792 350 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 PLD1Q13393 1074 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 E2F4Q16254 413 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 ATL3Q6DD88 541 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 CENPPQ6IPU0 288 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 PDZD4Q76G19 769 aaPredicted RBP19.2■□□□□ 0.66
HDDC3-201ENST00000330334 CCDC65Q8IXS2 484 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 ING5Q8WYH8 240 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 ELSPBP1Q96BH3 223 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 MCRS1Q96EZ8 462 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 DDX23Q9BUQ8 820 aaKnown RBP19.2■□□□□ 0.66
HDDC3-201ENST00000330334 IKZF4Q9H2S9 585 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 TBC1D7Q9P0N9 293 aa19.2■□□□□ 0.66
HDDC3-201ENST00000330334 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms