RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 STXBP4Q6ZWJ1 553 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 CEP120Q8N960 986 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 FLCNQ8NFG4 579 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 LRRC15Q8TF66 581 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 LEO1Q8WVC0 666 aaPredicted RBP9.15□□□□□ -0.94
MSL3-201ENST00000312196 RUBCNQ92622 972 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 ZBTB45Q96K62 511 aaPredicted RBP9.15□□□□□ -0.94
MSL3-201ENST00000312196 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 TNMDQ9H2S6 317 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 TMEM206Q9H813 350 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 PRMT8Q9NR22 394 aaPredicted RBP9.15□□□□□ -0.94
MSL3-201ENST00000312196 TBC1D7Q9P0N9 293 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 DNMT3BQ9UBC3 853 aaKnown RBP9.15□□□□□ -0.94
MSL3-201ENST00000312196 CDY1Q9Y6F8 540 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 TRIP11Q15643 1979 aa9.15□□□□□ -0.94
MSL3-201ENST00000312196 LACTBL1A8MY62 500 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 K7ENM7 598 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 PI15O43692 258 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 LRG1P02750 347 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 WEE2P0C1S8 567 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 CTXN3Q4LDR2 81 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 PABPC1LQ4VXU2 614 aaKnown RBP9.15□□□□□ -0.95
MSL3-201ENST00000312196 RRAGBQ5VZM2 374 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 SLC39A4Q6P5W5 647 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 ELMOD1Q8N336 334 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 ZBTB44Q8NCP5 570 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 SLC7A14Q8TBB6 771 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 DEPDC1BQ8WUY9 529 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 SECISBP2LQ93073 1101 aaKnown RBP9.15□□□□□ -0.95
MSL3-201ENST00000312196 MSTO1Q9BUK6 570 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 KIAA1586Q9HCI6 787 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 NUB1Q9Y5A7 615 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 INSL5Q9Y5Q6 135 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 DOCK8Q8NF50 2099 aa9.15□□□□□ -0.95
MSL3-201ENST00000312196 KIF26AQ9ULI4 1882 aaPredicted RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 EIF3DO15371 548 aaKnown RBP eCLIP9.14□□□□□ -0.95
MSL3-201ENST00000312196 CUTAO60888 179 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 KRT18P05783 430 aaKnown RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 ODC1P11926 461 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 RPL17P18621 184 aaKnown RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 LIG1P18858 919 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 BRCC3P46736 316 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 NRLP54845 237 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 KARSQ15046 597 aaKnown RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 LIMS2Q7Z4I7 341 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 GRASPQ7Z6J2 395 aaPredicted RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 CEP57Q86XR8 500 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 NPAS3Q8IXF0 933 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 LRRC52Q8N7C0 313 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 SUMF1Q8NBK3 374 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 B3GALT6Q96L58 329 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 EPC1Q9H2F5 836 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 ZSCAN32Q9NX65 697 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 CDH22Q9UJ99 828 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 CLIC4Q9Y696 253 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 WDR27A2RRH5 827 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 SFI1A8K8P3 1242 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 HNRNPDLO14979 420 aaKnown RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 STX6O43752 255 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 KINO60870 393 aaKnown RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 CXCL8P10145 99 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 PFKLP17858 780 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 HOXA6P31267 233 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 MCM4P33991 863 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 AMPD3Q01432 767 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 ENPEPQ07075 957 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 TMEM132DQ14C87 1099 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 C9orf57Q5W0N0 161 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 BRSK2Q8IWQ3 736 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 NUP210Q8TEM1 1887 aaPredicted RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 CACTINQ8WUQ7 758 aaKnown RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 FGF13Q92913 245 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 C18orf25Q96B23 403 aaPredicted RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 BICD1Q96G01 975 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 ZNF560Q96MR9 790 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 LRRC3Q9BY71 257 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 ZCWPW1Q9H0M4 648 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 USP25Q9UHP3 1055 aa9.14□□□□□ -0.95
MSL3-201ENST00000312196 AGO2Q9UKV8 859 aaKnown RBP9.14□□□□□ -0.95
MSL3-201ENST00000312196 NPHP3-ACAD11A0A0J9YXS1 232 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 RHOP08100 348 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 RFX1P22670 979 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 DDX6P26196 483 aaKnown RBP eCLIP9.13□□□□□ -0.95
MSL3-201ENST00000312196 CNR2P34972 360 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 TUFMP49411 452 aaKnown RBP9.13□□□□□ -0.95
MSL3-201ENST00000312196 YWHAHQ04917 246 aaPredicted RBP9.13□□□□□ -0.95
MSL3-201ENST00000312196 PPP2R5DQ14738 602 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 SV2CQ496J9 727 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 SLC44A4Q53GD3 710 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 GLRA4Q5JXX5 417 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 ITIH5Q86UX2 942 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 C12orf56Q8IXR9 622 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 CCDC65Q8IXS2 484 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 LINC00301Q8NCQ3 95 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 GPR152Q8TDT2 470 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 ZNF512Q96ME7 567 aaPredicted RBP9.13□□□□□ -0.95
MSL3-201ENST00000312196 SMOC2Q9H3U7 446 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 ABCB6Q9NP58 842 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 LTB4R2Q9NPC1 389 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms