RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 MMP19Q99542 508 aa17.6■□□□□ 0.41
TSPAN3-201ENST00000267970 RPAP1Q9BWH6 1393 aaPredicted RBP17.6■□□□□ 0.41
TSPAN3-201ENST00000267970 ABCD1P33897 745 aa17.6■□□□□ 0.41
TSPAN3-201ENST00000267970 MAPRE2Q15555 327 aa17.6■□□□□ 0.41
TSPAN3-201ENST00000267970 UTS2BQ765I0 119 aa17.6■□□□□ 0.41
TSPAN3-201ENST00000267970 STX19Q8N4C7 294 aa17.6■□□□□ 0.41
TSPAN3-201ENST00000267970 ZNF556Q9HAH1 456 aa17.6■□□□□ 0.41
TSPAN3-201ENST00000267970 HEG1Q9ULI3 1381 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 PVALEFA0A1B0GWK0 134 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 F5H6K3 240 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 AGTP01019 485 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 TFE3P19532 575 aaPredicted RBP17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 KLRC3Q07444 240 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 RCN1Q15293 331 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 SLC44A4Q53GD3 710 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 RCSD1Q6JBY9 416 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 MTERF3Q96E29 417 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 SPTLC1O15269 473 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 COMTP21964 271 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 MXD3Q9BW11 206 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 PSMC3IPQ9P2W1 217 aaPredicted RBP17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 FAM47DPA6NHR8 397 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 MMP10P09238 476 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 SERPINB1P30740 379 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 SLC29A2Q14542 456 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 ARHGAP17Q68EM7 881 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 URGCPQ8TCY9 931 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 GRAMD1AQ96CP6 724 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 REEP2Q9BRK0 252 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 SH3BP5LQ7L8J4 393 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 OSBPL10Q9BXB5 764 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 TMEM245Q9H330 911 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 CTTNBP2Q8WZ74 1663 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 ALDH6A1Q02252 535 aaKnown RBP17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 SHCBP1Q8NEM2 672 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 MANSC1Q9H8J5 431 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 SLC39A10Q9ULF5 831 aa17.59■□□□□ 0.41
TSPAN3-201ENST00000267970 GSG1L2A8MUP6 293 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 PTPN7P35236 360 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 MEI1Q5TIA1 1274 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 KLHL25Q9H0H3 589 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 RNF103O00237 685 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 MAPK10P53779 464 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 DUOXA2Q1HG44 320 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 OPTNQ96CV9 577 aa17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 NMD3Q96D46 503 aaKnown RBP17.58■□□□□ 0.41
TSPAN3-201ENST00000267970 MAGEA4P43358 317 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 VN1R5Q7Z5H4 357 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 MICU2Q8IYU8 434 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 LRRC34Q8IZ02 419 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 ELMO3Q96BJ8 720 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 MUC3BQ9H195 1237 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 SENP2Q9HC62 589 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 KIAA1586Q9HCI6 787 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 DDHD2O94830 711 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 C18orf8Q96DM3 657 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 METTL5Q9NRN9 209 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 ARHGEF37A1IGU5 675 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 EFCAB14O75071 495 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 JAMLQ86YT9 394 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 TRIM45Q9H8W5 580 aaPredicted RBP17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.4
TSPAN3-201ENST00000267970 NDUFS3O75489 264 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 BYSLQ13895 437 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 ALFQ53S48 1182 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 GTF2A1LQ9UNN4 478 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 ZNF263O14978 683 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 CTCFP49711 727 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 FOXP4Q8IVH2 680 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 ATG4AQ8WYN0 398 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 NOD2Q9HC29 1040 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 TCOF1Q13428 1488 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 TWF1Q12792 350 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 GALNTL6Q49A17 601 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 C16orf89Q6UX73 402 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 CCDC149Q6ZUS6 474 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 SPATA2LQ8IUW3 424 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 RCOR2Q8IZ40 523 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 ATPAF2Q8N5M1 289 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 FAM111AQ96PZ2 611 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 H2AFY2Q9P0M6 372 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 APEX2Q9UBZ4 518 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 PRKCBP05771 671 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 ASNSP08243 561 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 PDHBP11177 359 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 GLRBP48167 497 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 DALRD3Q5D0E6 543 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 OMA1Q96E52 524 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 CALR3Q96L12 384 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 C3orf70A6NLC5 250 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 GUCA1CO95843 209 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 ATP2C1P98194 919 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 CDK17Q00537 523 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 CPDO75976 1380 aa17.57■□□□□ 0.4
TSPAN3-201ENST00000267970 EEF2KO00418 725 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 MAP3K10Q02779 954 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 SLC18A3Q16572 532 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms