RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PLEKHG4Q58EX7 1191 aa15.85■□□□□ 0.13
XRCC1-201ENST00000262887 VPS52Q8N1B4 723 aa15.85■□□□□ 0.13
XRCC1-201ENST00000262887 PTCD3Q96EY7 689 aaKnown RBP15.85■□□□□ 0.13
XRCC1-201ENST00000262887 TUFT1Q9NNX1 390 aa15.85■□□□□ 0.13
XRCC1-201ENST00000262887 ANKFY1Q9P2R3 1169 aa15.85■□□□□ 0.13
XRCC1-201ENST00000262887 DCTN4Q9UJW0 460 aa15.85■□□□□ 0.13
XRCC1-201ENST00000262887 ZNF232Q9UNY5 417 aa15.85■□□□□ 0.13
XRCC1-201ENST00000262887 NEU2Q9Y3R4 380 aa15.85■□□□□ 0.13
XRCC1-201ENST00000262887 UBTFL6P0CB48 400 aaPredicted RBP15.84■□□□□ 0.13
XRCC1-201ENST00000262887 FGFR1P11362 822 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 SNAP25P60880 206 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 RASIP1Q5U651 963 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 LVRNQ6Q4G3 990 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 GSTA5Q7RTV2 222 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 ZCCHC9Q8N567 271 aaKnown RBP15.84■□□□□ 0.13
XRCC1-201ENST00000262887 AZIN2Q96A70 460 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 MRRFQ96E11 262 aaKnown RBP15.84■□□□□ 0.13
XRCC1-201ENST00000262887 NSL1Q96IY1 281 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 NR1H4Q96RI1 486 aaPredicted RBP15.84■□□□□ 0.13
XRCC1-201ENST00000262887 TAF1LQ8IZX4 1826 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 CYP11B1P15538 503 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 SHMT1P34896 483 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 GRAPQ13588 217 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 P3H1Q32P28 736 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 SYDE2Q5VT97 1194 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 CAPN12Q6ZSI9 719 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 SCYL3Q8IZE3 742 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 GRAPLQ8TC17 118 aaPredicted RBP15.84■□□□□ 0.13
XRCC1-201ENST00000262887 UBE2OQ9C0C9 1292 aaKnown RBP15.84■□□□□ 0.13
XRCC1-201ENST00000262887 VCX3BQ9H321 246 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 VCX3AQ9NNX9 186 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 LARSQ9P2J5 1176 aaKnown RBP15.84■□□□□ 0.13
XRCC1-201ENST00000262887 DAGLAQ9Y4D2 1042 aa15.84■□□□□ 0.13
XRCC1-201ENST00000262887 WNK3Q9BYP7 1800 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 CREB3O43889 395 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 FOSP01100 380 aaPredicted RBP15.83■□□□□ 0.13
XRCC1-201ENST00000262887 RALAP11233 206 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 CIITAP33076 1130 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 CETN2P41208 172 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 MXI1P50539 228 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 CNPY1Q3B7I2 92 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 CERKLQ49MI3 558 aaPredicted RBP15.83■□□□□ 0.13
XRCC1-201ENST00000262887 RFWD2Q8NHY2 731 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 WDR60Q8WVS4 1066 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 KREMEN1Q96MU8 473 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 NDNQ99608 321 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 AMNQ9BXJ7 453 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 ADAM33Q9BZ11 813 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 FOXP3Q9BZS1 431 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 KRT82Q9NSB4 513 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 KANSL3Q9P2N6 904 aa15.83■□□□□ 0.13
XRCC1-201ENST00000262887 TISP43B9A030 160 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 TYROBPO43914 113 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 UFL1O94874 794 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 LYNP07948 512 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 PLS3P13797 630 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 HOXA13P31271 388 aaPredicted RBP15.83■□□□□ 0.12
XRCC1-201ENST00000262887 MAPK6Q16659 721 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 WDR72Q3MJ13 1102 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 HP1BP3Q5SSJ5 553 aaPredicted RBP15.83■□□□□ 0.12
XRCC1-201ENST00000262887 KBTBD2Q8IY47 623 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 NGLY1Q96IV0 654 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 TTC25Q96NG3 672 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 DDX4Q9NQI0 724 aaKnown RBP15.83■□□□□ 0.12
XRCC1-201ENST00000262887 HEY2Q9UBP5 337 aa15.83■□□□□ 0.12
XRCC1-201ENST00000262887 K7ENM7 598 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 MFAP3P55082 362 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 MYBPC2Q14324 1141 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 DAB2IPQ5VWQ8 1189 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 ACAD10Q6JQN1 1059 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 MYLK4Q86YV6 388 aaPredicted RBP15.82■□□□□ 0.12
XRCC1-201ENST00000262887 OPTNQ96CV9 577 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
XRCC1-201ENST00000262887 MMADHCQ9H3L0 296 aaPredicted RBP15.82■□□□□ 0.12
XRCC1-201ENST00000262887 VPS37BQ9H9H4 285 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 DDX43Q9NXZ2 648 aaKnown RBP15.82■□□□□ 0.12
XRCC1-201ENST00000262887 A0A0G2JND7 137 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 MCL1Q07820 350 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 OVGP1Q12889 678 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 CCNG2Q16589 344 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 RINLQ6ZS11 566 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 OTOP1Q7RTM1 612 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 SHC3Q92529 594 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 SPATA16Q9BXB7 569 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 ATRNL1Q5VV63 1379 aa15.82■□□□□ 0.12
XRCC1-201ENST00000262887 A0A1W2PPM1 405 aa15.81■□□□□ 0.12
XRCC1-201ENST00000262887 WDR91A4D1P6 747 aa15.81■□□□□ 0.12
XRCC1-201ENST00000262887 PIK3CDO00329 1044 aa15.81■□□□□ 0.12
XRCC1-201ENST00000262887 ZCCHC18P0CG32 403 aa15.81■□□□□ 0.12
XRCC1-201ENST00000262887 HSPA1LP34931 641 aa15.81■□□□□ 0.12
XRCC1-201ENST00000262887 KLF1Q13351 362 aaPredicted RBP15.81■□□□□ 0.12
XRCC1-201ENST00000262887 THOC5Q13769 683 aaKnown RBP15.81■□□□□ 0.12
XRCC1-201ENST00000262887 SEPT7Q16181 437 aaKnown RBP15.81■□□□□ 0.12
XRCC1-201ENST00000262887 C1orf220Q5T0J3 134 aa15.81■□□□□ 0.12
XRCC1-201ENST00000262887 C15orf52Q6ZUT6 534 aaKnown RBP15.81■□□□□ 0.12
XRCC1-201ENST00000262887 ANKS1BQ7Z6G8 1248 aa15.81■□□□□ 0.12
XRCC1-201ENST00000262887 PDCD7Q8N8D1 485 aaKnown RBP15.81■□□□□ 0.12
XRCC1-201ENST00000262887 DDX27Q96GQ7 796 aaKnown RBP15.81■□□□□ 0.12
XRCC1-201ENST00000262887 CBWD1Q9BRT8 395 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms