RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Plin4O88492 1403 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Cnbd1B1AWM0 430 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 PurbO35295 324 aaKnown RBP15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Tnnc1P19123 161 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gdf6P43028 454 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Tmprss15P97435 1069 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Phactr1Q2M3X8 580 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Upf3aQ3ULJ3 422 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Hspa4Q61316 841 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 PtprjQ64455 1238 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Arhgap10Q6Y5D8 786 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 NrcamQ810U4 1256 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Wbp1lQ8BGW2 348 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Znf473Q8BI67 892 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Aste1Q8BIR2 672 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Dnm3Q8BZ98 863 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Abi1Q8CBW3 481 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Eif2b5Q8CHW4 717 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Dnajc28Q8VCE1 385 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Bzw2Q91VK1 419 aaKnown RBP15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Creb3l3Q91XE9 479 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Ndufaf7Q9CWG8 436 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 MlklQ9D2Y4 472 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 1700123K08RikQ9D991 295 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Fgf22Q9ESS2 162 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Acox2Q9QXD1 681 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 CtsfQ9R013 462 aa15.73■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Ttc3O88196 1979 aaKnown RBP15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm13276A0A087WR18 182 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Scgb2b11A0A087WR49 112 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Slc23a4A0A0J9YUX7 615 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Zscan4-ps3A0A1B0GRH6 506 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Zscan4-ps2A0A1C7CYU6 506 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Rap1gapA2ALS5 663 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Cyp2b13A6H6J2 491 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Tnfaip1O70479 316 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Pax3P24610 479 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Cdk4P30285 303 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Sox8Q04886 464 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Grm2Q14BI2 872 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Olfr538Q7TRT5 310 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Tor4aQ8BH02 426 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Zmym6Q8BS54 1249 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Pwp2Q8BU03 919 aaKnown RBP15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Fam163bQ8BUM6 167 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Pyhin1Q8BV49 420 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Smoc2Q8CD91 447 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Pak2Q8CIN4 524 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Fam187aQ9D3R5 417 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Dnajb4Q9D832 337 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Spatc1lQ9D9W0 342 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Rab13Q9DD03 202 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Peg12Q9WVA7 283 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Scn1aA2APX8 2009 aa15.72■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Igkv18-36A0A075B5M9 114 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Olfr391-psA0A0U1RNJ4 312 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 AU015836B2RUM3 263 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm28042B7ZCM9 1014 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm281D3Z1Y0 860 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 BC049352E9Q2Z6 85 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Hsd17b14E9Q3D4 273 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm11239E9Q5Z9 360 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm11237F2Z3W5 360 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm11238F2Z478 360 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Abcb1bP06795 1276 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Slc10a3P21129 473 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 YwhaeP62259 255 aaKnown RBP15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gbp1Q01514 589 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Tekt4Q149S1 447 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Smcr8Q3UMB5 935 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm428Q3UTE2 360 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Maip1Q8BHE8 291 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Ugt2b1Q8R084 529 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gga1Q8R0H9 635 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Klhl36Q8R124 613 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Timd2Q8R183 305 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Eif4a3Q91VC3 411 aaKnown RBP15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 CalcbQ99MP3 130 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Ergic2Q9CR89 377 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Scyl3Q9DBQ7 735 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Ipo7Q9EPL8 1038 aaKnown RBP15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Tcirg1Q9JHF5 834 aa15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gtf2ird1Q9JI57 1104 aaKnown RBP15.71■□□□□ 0.11
Ercc1-201ENSMUST00000003645 Gm27029A2A4P4 543 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Znf568E9PYI1 671 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Pbx2O35984 430 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Chmp6P0C0A3 200 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Gp1bbP56400 206 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 B3gat3P58158 335 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Nrp1P97333 923 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Ttc39dQ0VF76 604 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 PomkQ3TUA9 349 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Ppp1r12cQ3UMT1 782 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Tmem232Q5K6N0 675 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Dnajc16Q80TN4 772 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Depdc1bQ8BH88 529 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Ints6lQ8BND4 861 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Mei4Q8BRM6 389 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Frat2Q8K025 231 aa15.7■□□□□ 0.1
Ercc1-201ENSMUST00000003645 Ccdc9Q8VC31 543 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms