RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
TUBD1-206ENST00000539018 LAPTM4BQ86VI4 370 aa13.66□□□□□ -0.22
TUBD1-206ENST00000539018 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
TUBD1-206ENST00000539018 STAC3Q96MF2 364 aa13.66□□□□□ -0.22
TUBD1-206ENST00000539018 PARP9Q8IXQ6 854 aa13.65□□□□□ -0.22
TUBD1-206ENST00000539018 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
TUBD1-206ENST00000539018 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
TUBD1-206ENST00000539018 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
TUBD1-206ENST00000539018 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
TUBD1-206ENST00000539018 GIGYF2Q6Y7W6 1299 aaKnown RBP13.6□□□□□ -0.23
TUBD1-206ENST00000539018 TMUB1Q9BVT8 246 aa13.6□□□□□ -0.23
TUBD1-206ENST00000539018 REPIN1Q9BWE0 567 aaKnown RBP13.6□□□□□ -0.23
TUBD1-206ENST00000539018 KDM4CQ9H3R0 1056 aa13.6□□□□□ -0.23
TUBD1-206ENST00000539018 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
TUBD1-206ENST00000539018 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
TUBD1-206ENST00000539018 ZFRQ96KR1 1074 aaKnown RBP13.58□□□□□ -0.24
TUBD1-206ENST00000539018 GOLGA8CPA6NN73 597 aa13.57□□□□□ -0.24
TUBD1-206ENST00000539018 SWT1Q5T5J6 900 aaKnown RBP13.56□□□□□ -0.24
TUBD1-206ENST00000539018 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
TUBD1-206ENST00000539018 SAMD7Q7Z3H4 446 aa13.54□□□□□ -0.24
TUBD1-206ENST00000539018 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
TUBD1-206ENST00000539018 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
TUBD1-206ENST00000539018 SULF1Q8IWU6 871 aa13.53□□□□□ -0.24
TUBD1-206ENST00000539018 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
TUBD1-206ENST00000539018 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-206ENST00000539018 ANKK1Q8NFD2 765 aa13.52□□□□□ -0.25
TUBD1-206ENST00000539018 MS4A1P11836 297 aa13.51□□□□□ -0.25
TUBD1-206ENST00000539018 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
TUBD1-206ENST00000539018 LRCH3Q96II8 777 aa13.51□□□□□ -0.25
TUBD1-206ENST00000539018 DDX11L8A8MPP1 907 aa13.5□□□□□ -0.25
TUBD1-206ENST00000539018 RNF40O75150 1001 aa13.49□□□□□ -0.25
TUBD1-206ENST00000539018 WNT2BQ93097 391 aa13.49□□□□□ -0.25
TUBD1-206ENST00000539018 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-206ENST00000539018 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-206ENST00000539018 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
TUBD1-206ENST00000539018 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
TUBD1-206ENST00000539018 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
TUBD1-206ENST00000539018 FAM117AQ9C073 453 aa13.46□□□□□ -0.25
TUBD1-206ENST00000539018 SOWAHBA6NEL2 793 aa13.45□□□□□ -0.26
TUBD1-206ENST00000539018 CD46P15529 392 aa13.45□□□□□ -0.26
TUBD1-206ENST00000539018 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
TUBD1-206ENST00000539018 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
TUBD1-206ENST00000539018 BEGAINQ9BUH8 593 aa13.44□□□□□ -0.26
TUBD1-206ENST00000539018 BCAMP50895 628 aa13.43□□□□□ -0.26
TUBD1-206ENST00000539018 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
TUBD1-206ENST00000539018 SLC10A3P09131 477 aa13.42□□□□□ -0.26
TUBD1-206ENST00000539018 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
TUBD1-206ENST00000539018 KCTD12Q96CX2 325 aaKnown RBP13.42□□□□□ -0.26
TUBD1-206ENST00000539018 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
TUBD1-206ENST00000539018 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
TUBD1-206ENST00000539018 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
TUBD1-206ENST00000539018 HPS5Q9UPZ3 1129 aa13.4□□□□□ -0.26
TUBD1-206ENST00000539018 THSD4Q6ZMP0 1018 aa13.39□□□□□ -0.27
TUBD1-206ENST00000539018 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
TUBD1-206ENST00000539018 PPP4CP60510 307 aa13.38□□□□□ -0.27
TUBD1-206ENST00000539018 TSR3Q9UJK0 312 aaKnown RBP13.38□□□□□ -0.27
TUBD1-206ENST00000539018 GCGRP47871 477 aa13.37□□□□□ -0.27
TUBD1-206ENST00000539018 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
TUBD1-206ENST00000539018 CFHP08603 1231 aa13.36□□□□□ -0.27
TUBD1-206ENST00000539018 WIZO95785 1651 aa13.35□□□□□ -0.27
TUBD1-206ENST00000539018 NUTM1Q86Y26 1132 aa13.35□□□□□ -0.27
TUBD1-206ENST00000539018 KMT5BQ4FZB7 885 aa13.34□□□□□ -0.27
TUBD1-206ENST00000539018 DIXDC1Q155Q3 683 aa13.33□□□□□ -0.28
TUBD1-206ENST00000539018 KDM4AO75164 1064 aa13.32□□□□□ -0.28
TUBD1-206ENST00000539018 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
TUBD1-206ENST00000539018 PRR14Q9BWN1 585 aa13.32□□□□□ -0.28
TUBD1-206ENST00000539018 TBC1D2Q9BYX2 928 aa13.32□□□□□ -0.28
TUBD1-206ENST00000539018 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
TUBD1-206ENST00000539018 WBP1LQ9NX94 342 aa13.32□□□□□ -0.28
TUBD1-206ENST00000539018 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
TUBD1-206ENST00000539018 RNF166Q96A37 237 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-206ENST00000539018 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
TUBD1-206ENST00000539018 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
TUBD1-206ENST00000539018 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
TUBD1-206ENST00000539018 PTPN5P54829 565 aa13.29□□□□□ -0.28
TUBD1-206ENST00000539018 USP46P62068 366 aa13.29□□□□□ -0.28
TUBD1-206ENST00000539018 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
TUBD1-206ENST00000539018 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
TUBD1-206ENST00000539018 APLP1P51693 650 aa13.27□□□□□ -0.29
TUBD1-206ENST00000539018 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
TUBD1-206ENST00000539018 FUT2Q10981 343 aa13.26□□□□□ -0.29
TUBD1-206ENST00000539018 NYAP1Q6ZVC0 841 aa13.26□□□□□ -0.29
TUBD1-206ENST00000539018 GOPCQ9HD26 462 aa13.26□□□□□ -0.29
TUBD1-206ENST00000539018 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
TUBD1-206ENST00000539018 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
TUBD1-206ENST00000539018 HOXA2O43364 376 aa13.24□□□□□ -0.29
TUBD1-206ENST00000539018 SKIV2LQ15477 1246 aaKnown RBP13.24□□□□□ -0.29
TUBD1-206ENST00000539018 MOXD2PA6NHM9 499 aa13.23□□□□□ -0.29
TUBD1-206ENST00000539018 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
TUBD1-206ENST00000539018 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
TUBD1-206ENST00000539018 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
TUBD1-206ENST00000539018 POLR3EQ9NVU0 708 aa13.22□□□□□ -0.29
TUBD1-206ENST00000539018 RIC3Q7Z5B4 369 aa13.21□□□□□ -0.29
TUBD1-206ENST00000539018 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
TUBD1-206ENST00000539018 NDUFV2P19404 249 aa13.2□□□□□ -0.3
TUBD1-206ENST00000539018 RSBN1LQ6PCB5 846 aaPredicted RBP13.2□□□□□ -0.3
TUBD1-206ENST00000539018 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
TUBD1-206ENST00000539018 ATP1B4Q9UN42 357 aaPredicted RBP13.2□□□□□ -0.3
TUBD1-206ENST00000539018 SPTLC1O15269 473 aa13.19□□□□□ -0.3
TUBD1-206ENST00000539018 PUS10Q3MIT2 529 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms