RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
LINC01088-208ENST00000511895 AMHR2Q16671 573 aa12.73□□□□□ -0.37
LINC01088-208ENST00000511895 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
LINC01088-208ENST00000511895 LRCH3Q96II8 777 aa12.73□□□□□ -0.37
LINC01088-208ENST00000511895 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
LINC01088-208ENST00000511895 GPCPD1Q9NPB8 672 aa12.71□□□□□ -0.37
LINC01088-208ENST00000511895 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.71□□□□□ -0.37
LINC01088-208ENST00000511895 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.37
LINC01088-208ENST00000511895 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
LINC01088-208ENST00000511895 PARP9Q8IXQ6 854 aa12.69□□□□□ -0.38
LINC01088-208ENST00000511895 BCAMP50895 628 aa12.68□□□□□ -0.38
LINC01088-208ENST00000511895 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
LINC01088-208ENST00000511895 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
LINC01088-208ENST00000511895 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
LINC01088-208ENST00000511895 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
LINC01088-208ENST00000511895 REPIN1Q9BWE0 567 aaKnown RBP12.66□□□□□ -0.38
LINC01088-208ENST00000511895 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
LINC01088-208ENST00000511895 SULF1Q8IWU6 871 aa12.65□□□□□ -0.38
LINC01088-208ENST00000511895 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
LINC01088-208ENST00000511895 RSPH4AQ5TD94 716 aa12.64□□□□□ -0.39
LINC01088-208ENST00000511895 RNF166Q96A37 237 aaPredicted RBP12.64□□□□□ -0.39
LINC01088-208ENST00000511895 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
LINC01088-208ENST00000511895 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
LINC01088-208ENST00000511895 THSD4Q6ZMP0 1018 aa12.63□□□□□ -0.39
LINC01088-208ENST00000511895 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
LINC01088-208ENST00000511895 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
LINC01088-208ENST00000511895 PTPN5P54829 565 aa12.62□□□□□ -0.39
LINC01088-208ENST00000511895 PPP4CP60510 307 aa12.62□□□□□ -0.39
LINC01088-208ENST00000511895 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
LINC01088-208ENST00000511895 KDM4CQ9H3R0 1056 aa12.61□□□□□ -0.39
LINC01088-208ENST00000511895 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
LINC01088-208ENST00000511895 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
LINC01088-208ENST00000511895 MMRN1Q13201 1228 aa12.58□□□□□ -0.4
LINC01088-208ENST00000511895 SLC10A3P09131 477 aa12.57□□□□□ -0.4
LINC01088-208ENST00000511895 WBP1LQ9NX94 342 aa12.57□□□□□ -0.4
LINC01088-208ENST00000511895 MS4A1P11836 297 aa12.56□□□□□ -0.4
LINC01088-208ENST00000511895 CFHP08603 1231 aa12.55□□□□□ -0.4
LINC01088-208ENST00000511895 CD46P15529 392 aa12.55□□□□□ -0.4
LINC01088-208ENST00000511895 BEGAINQ9BUH8 593 aa12.54□□□□□ -0.4
LINC01088-208ENST00000511895 KMT5BQ4FZB7 885 aa12.53□□□□□ -0.4
LINC01088-208ENST00000511895 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
LINC01088-208ENST00000511895 HCSTQ9UBK5 93 aa12.51□□□□□ -0.41
LINC01088-208ENST00000511895 GCGRP47871 477 aa12.5□□□□□ -0.41
LINC01088-208ENST00000511895 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
LINC01088-208ENST00000511895 FAM117AQ9C073 453 aa12.5□□□□□ -0.41
LINC01088-208ENST00000511895 APLP1P51693 650 aa12.48□□□□□ -0.41
LINC01088-208ENST00000511895 NYAP1Q6ZVC0 841 aa12.48□□□□□ -0.41
LINC01088-208ENST00000511895 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
LINC01088-208ENST00000511895 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
LINC01088-208ENST00000511895 KDM4AO75164 1064 aa12.46□□□□□ -0.41
LINC01088-208ENST00000511895 ACTN4O43707 911 aaKnown RBP12.45□□□□□ -0.42
LINC01088-208ENST00000511895 FUT2Q10981 343 aa12.44□□□□□ -0.42
LINC01088-208ENST00000511895 PLSCR2Q9NRY7 297 aa12.44□□□□□ -0.42
LINC01088-208ENST00000511895 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
LINC01088-208ENST00000511895 PCDHB3Q9Y5E6 796 aa12.43□□□□□ -0.42
LINC01088-208ENST00000511895 DIXDC1Q155Q3 683 aa12.42□□□□□ -0.42
LINC01088-208ENST00000511895 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
LINC01088-208ENST00000511895 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
LINC01088-208ENST00000511895 USP46P62068 366 aa12.41□□□□□ -0.42
LINC01088-208ENST00000511895 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
LINC01088-208ENST00000511895 ATP6V1AP38606 617 aa12.4□□□□□ -0.42
LINC01088-208ENST00000511895 PUS10Q3MIT2 529 aaKnown RBP12.4□□□□□ -0.42
LINC01088-208ENST00000511895 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
LINC01088-208ENST00000511895 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
LINC01088-208ENST00000511895 COPS2P61201 443 aa12.38□□□□□ -0.43
LINC01088-208ENST00000511895 HOXA2O43364 376 aa12.37□□□□□ -0.43
LINC01088-208ENST00000511895 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
LINC01088-208ENST00000511895 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
LINC01088-208ENST00000511895 NDUFV2P19404 249 aa12.35□□□□□ -0.43
LINC01088-208ENST00000511895 MYSM1Q5VVJ2 828 aa12.35□□□□□ -0.43
LINC01088-208ENST00000511895 HLA-CQ95604 372 aa12.35□□□□□ -0.43
LINC01088-208ENST00000511895 MTRQ99707 1265 aa12.35□□□□□ -0.43
LINC01088-208ENST00000511895 POLR3EQ9NVU0 708 aa12.35□□□□□ -0.43
LINC01088-208ENST00000511895 NR1I2O75469 434 aa12.34□□□□□ -0.43
LINC01088-208ENST00000511895 MORN1Q5T089 497 aa12.34□□□□□ -0.43
LINC01088-208ENST00000511895 GUCA2AQ02747 115 aa12.33□□□□□ -0.44
LINC01088-208ENST00000511895 RIC3Q7Z5B4 369 aa12.33□□□□□ -0.44
LINC01088-208ENST00000511895 FDX1P10109 184 aa12.32□□□□□ -0.44
LINC01088-208ENST00000511895 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
LINC01088-208ENST00000511895 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
LINC01088-208ENST00000511895 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
LINC01088-208ENST00000511895 RSBN1LQ6PCB5 846 aaPredicted RBP12.31□□□□□ -0.44
LINC01088-208ENST00000511895 SLC27A5Q9Y2P5 690 aa12.31□□□□□ -0.44
LINC01088-208ENST00000511895 CSPP1Q1MSJ5 1256 aa12.3□□□□□ -0.44
LINC01088-208ENST00000511895 TJAP1Q5JTD0 557 aa12.3□□□□□ -0.44
LINC01088-208ENST00000511895 SCUBE3Q8IX30 993 aa12.3□□□□□ -0.44
LINC01088-208ENST00000511895 SKIV2LQ15477 1246 aaKnown RBP12.29□□□□□ -0.44
LINC01088-208ENST00000511895 SPTLC1O15269 473 aa12.28□□□□□ -0.44
LINC01088-208ENST00000511895 Q3C1V9 767 aa12.28□□□□□ -0.44
LINC01088-208ENST00000511895 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
LINC01088-208ENST00000511895 PCMTD1Q96MG8 357 aaPredicted RBP12.28□□□□□ -0.44
LINC01088-208ENST00000511895 LIMD1Q9UGP4 676 aa12.28□□□□□ -0.44
LINC01088-208ENST00000511895 ZPR1O75312 459 aa12.27□□□□□ -0.45
LINC01088-208ENST00000511895 KCNC4Q03721 635 aa12.27□□□□□ -0.45
LINC01088-208ENST00000511895 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
LINC01088-208ENST00000511895 GJA5P36382 358 aa12.26□□□□□ -0.45
LINC01088-208ENST00000511895 PCDHGC3Q9UN70 934 aa12.26□□□□□ -0.45
LINC01088-208ENST00000511895 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
LINC01088-208ENST00000511895 PCDHB15Q9Y5E8 787 aa12.25□□□□□ -0.45
LINC01088-208ENST00000511895 TLL1O43897 1013 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms