RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 OFD1O75665 1012 aa10.97□□□□□ -0.65
TTC3-216ENST00000479930 DDX23Q9BUQ8 820 aaKnown RBP10.96□□□□□ -0.65
TTC3-216ENST00000479930 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.66
TTC3-216ENST00000479930 GOLGA6L3A6NEY3 463 aa10.96□□□□□ -0.66
TTC3-216ENST00000479930 IPO7O95373 1038 aaKnown RBP10.95□□□□□ -0.66
TTC3-216ENST00000479930 ERCC6Q03468 1493 aa10.95□□□□□ -0.66
TTC3-216ENST00000479930 DESP17661 470 aa10.95□□□□□ -0.66
TTC3-216ENST00000479930 KRT18P05783 430 aaKnown RBP10.95□□□□□ -0.66
TTC3-216ENST00000479930 KANK1Q14678 1352 aa10.95□□□□□ -0.66
TTC3-216ENST00000479930 SEPT7Q16181 437 aaKnown RBP10.94□□□□□ -0.66
TTC3-216ENST00000479930 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
TTC3-216ENST00000479930 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
TTC3-216ENST00000479930 HDAC5Q9UQL6 1122 aa10.94□□□□□ -0.66
TTC3-216ENST00000479930 ANKRD18AQ8IVF6 992 aa10.93□□□□□ -0.66
TTC3-216ENST00000479930 ADRA2BP18089 450 aa10.93□□□□□ -0.66
TTC3-216ENST00000479930 ANKRD20A12PQ8NF67 263 aa10.93□□□□□ -0.66
TTC3-216ENST00000479930 DNAI2Q9GZS0 605 aa10.92□□□□□ -0.66
TTC3-216ENST00000479930 FOSBP53539 338 aa10.92□□□□□ -0.66
TTC3-216ENST00000479930 CCDC173Q0VFZ6 552 aa10.92□□□□□ -0.66
TTC3-216ENST00000479930 DHX37Q8IY37 1157 aaKnown RBP10.92□□□□□ -0.66
TTC3-216ENST00000479930 CHMP4AQ9BY43 222 aa10.92□□□□□ -0.66
TTC3-216ENST00000479930 B4GALNT3Q6L9W6 998 aa10.92□□□□□ -0.66
TTC3-216ENST00000479930 ZNF354CQ86Y25 554 aa10.92□□□□□ -0.66
TTC3-216ENST00000479930 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
TTC3-216ENST00000479930 RTN4Q9NQC3 1192 aaKnown RBP10.92□□□□□ -0.66
TTC3-216ENST00000479930 HSP90AA2PQ14568 343 aaPredicted RBP10.91□□□□□ -0.66
TTC3-216ENST00000479930 PSME1Q06323 249 aa10.91□□□□□ -0.66
TTC3-216ENST00000479930 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
TTC3-216ENST00000479930 ZHX3Q9H4I2 956 aa10.91□□□□□ -0.66
TTC3-216ENST00000479930 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
TTC3-216ENST00000479930 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
TTC3-216ENST00000479930 CARD11Q9BXL7 1154 aa10.91□□□□□ -0.66
TTC3-216ENST00000479930 CDK5RAP3Q96JB5 506 aa10.91□□□□□ -0.66
TTC3-216ENST00000479930 RSPH6AQ9H0K4 717 aa10.9□□□□□ -0.66
TTC3-216ENST00000479930 SSX2IPQ9Y2D8 614 aa10.9□□□□□ -0.66
TTC3-216ENST00000479930 EIF2S2P20042 333 aaKnown RBP10.9□□□□□ -0.66
TTC3-216ENST00000479930 KIF16BQ96L93 1317 aa10.9□□□□□ -0.66
TTC3-216ENST00000479930 RUFY1Q96T51 708 aa10.9□□□□□ -0.66
TTC3-216ENST00000479930 CDR1P51861 262 aa10.9□□□□□ -0.66
TTC3-216ENST00000479930 STK25O00506 426 aa10.9□□□□□ -0.67
TTC3-216ENST00000479930 XPCQ01831 940 aaPredicted RBP10.89□□□□□ -0.67
TTC3-216ENST00000479930 ZBTB24O43167 697 aaPredicted RBP10.89□□□□□ -0.67
TTC3-216ENST00000479930 KIF3AQ9Y496 699 aa10.89□□□□□ -0.67
TTC3-216ENST00000479930 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
TTC3-216ENST00000479930 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
TTC3-216ENST00000479930 TRDNQ13061 729 aa10.88□□□□□ -0.67
TTC3-216ENST00000479930 STK11IPQ8N1F8 1099 aa10.88□□□□□ -0.67
TTC3-216ENST00000479930 SSR1P43307 286 aaKnown RBP10.88□□□□□ -0.67
TTC3-216ENST00000479930 CPLX2Q6PUV4 134 aaKnown RBP10.88□□□□□ -0.67
TTC3-216ENST00000479930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■■□ 21.8
TTC3-216ENST00000479930 ANAPC15P60006 121 aa10.88□□□□□ -0.67
TTC3-216ENST00000479930 PDE3BQ13370 1112 aa10.88□□□□□ -0.67
TTC3-216ENST00000479930 PDILTQ8N807 584 aa10.87□□□□□ -0.67
TTC3-216ENST00000479930 CCDC112Q8NEF3 446 aa10.87□□□□□ -0.67
TTC3-216ENST00000479930 MFAP1P55081 439 aaKnown RBP10.87□□□□□ -0.67
TTC3-216ENST00000479930 LRRFIP1Q32MZ4 808 aaKnown RBP10.87□□□□□ -0.67
TTC3-216ENST00000479930 PRKCSHP14314 528 aaPredicted RBP10.86□□□□□ -0.67
TTC3-216ENST00000479930 TAF12Q16514 161 aa10.86□□□□□ -0.67
TTC3-216ENST00000479930 LMOD3Q0VAK6 560 aa10.86□□□□□ -0.67
TTC3-216ENST00000479930 ENOX2Q16206 610 aaKnown RBP10.86□□□□□ -0.67
TTC3-216ENST00000479930 NECTIN2Q92692 538 aa10.86□□□□□ -0.67
TTC3-216ENST00000479930 NEXNQ0ZGT2 675 aa10.86□□□□□ -0.67
TTC3-216ENST00000479930 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
TTC3-216ENST00000479930 CPLX1O14810 134 aa10.85□□□□□ -0.67
TTC3-216ENST00000479930 ZWINTO95229 277 aa10.85□□□□□ -0.67
TTC3-216ENST00000479930 SH3BP5O60239 455 aa10.85□□□□□ -0.67
TTC3-216ENST00000479930 ZNF76P36508 570 aa10.85□□□□□ -0.67
TTC3-216ENST00000479930 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
TTC3-216ENST00000479930 TMOD2Q9NZR1 351 aa10.85□□□□□ -0.67
TTC3-216ENST00000479930 TEFQ10587 303 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 LPXNO60711 386 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 EZRP15311 586 aaKnown RBP10.84□□□□□ -0.67
TTC3-216ENST00000479930 SYAP1Q96A49 352 aaPredicted RBP10.84□□□□□ -0.67
TTC3-216ENST00000479930 BICDL1Q6ZP65 573 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 DIAPH3Q9NSV4 1193 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
TTC3-216ENST00000479930 CHMP4CQ96CF2 233 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 LIG1P18858 919 aa10.84□□□□□ -0.67
TTC3-216ENST00000479930 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
TTC3-216ENST00000479930 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
TTC3-216ENST00000479930 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
TTC3-216ENST00000479930 CFDP1Q9UEE9 299 aaPredicted RBP10.83□□□□□ -0.68
TTC3-216ENST00000479930 WWC3Q9ULE0 1092 aa10.83□□□□□ -0.68
TTC3-216ENST00000479930 TTLL5Q6EMB2 1281 aa10.83□□□□□ -0.68
TTC3-216ENST00000479930 GOLGA6L19H0YKK7 550 aa10.82□□□□□ -0.68
TTC3-216ENST00000479930 CCDC191Q8NCU4 936 aa10.82□□□□□ -0.68
TTC3-216ENST00000479930 TSPYL1Q9H0U9 437 aa10.82□□□□□ -0.68
TTC3-216ENST00000479930 IPO8O15397 1037 aaKnown RBP10.82□□□□□ -0.68
TTC3-216ENST00000479930 NOC2LQ9Y3T9 749 aaKnown RBP10.82□□□□□ -0.68
TTC3-216ENST00000479930 NF2P35240 595 aa10.82□□□□□ -0.68
TTC3-216ENST00000479930 GPS2Q13227 327 aa10.82□□□□□ -0.68
TTC3-216ENST00000479930 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
TTC3-216ENST00000479930 MYO6Q9UM54 1294 aa10.82□□□□□ -0.68
TTC3-216ENST00000479930 U2AF1L5P0DN76 240 aaPredicted RBP10.82□□□□□ -0.68
TTC3-216ENST00000479930 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.68
TTC3-216ENST00000479930 WASHC4Q2M389 1173 aa10.81□□□□□ -0.68
TTC3-216ENST00000479930 CCDC181Q5TID7 509 aa10.81□□□□□ -0.68
TTC3-216ENST00000479930 ARL1P40616 181 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms