RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
CNOT9-206ENST00000473626 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
CNOT9-206ENST00000473626 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
CNOT9-206ENST00000473626 SSTR3P32745 418 aaPredicted RBP11.89□□□□□ -0.51
CNOT9-206ENST00000473626 LAPTM4BQ86VI4 370 aa11.89□□□□□ -0.51
CNOT9-206ENST00000473626 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
CNOT9-206ENST00000473626 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
CNOT9-206ENST00000473626 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
CNOT9-206ENST00000473626 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
CNOT9-206ENST00000473626 IL27Q8NEV9 243 aa11.87□□□□□ -0.51
CNOT9-206ENST00000473626 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
CNOT9-206ENST00000473626 RNF40O75150 1001 aa11.86□□□□□ -0.51
CNOT9-206ENST00000473626 BCAMP50895 628 aa11.84□□□□□ -0.51
CNOT9-206ENST00000473626 SLC10A3P09131 477 aa11.83□□□□□ -0.52
CNOT9-206ENST00000473626 WNT2BQ93097 391 aa11.83□□□□□ -0.52
CNOT9-206ENST00000473626 HDGFP51858 240 aaKnown RBP11.82□□□□□ -0.52
CNOT9-206ENST00000473626 RDH13Q8NBN7 331 aa11.82□□□□□ -0.52
CNOT9-206ENST00000473626 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
CNOT9-206ENST00000473626 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
CNOT9-206ENST00000473626 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
CNOT9-206ENST00000473626 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
CNOT9-206ENST00000473626 LRCH3Q96II8 777 aa11.8□□□□□ -0.52
CNOT9-206ENST00000473626 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.8□□□□□ -0.52
CNOT9-206ENST00000473626 CD46P15529 392 aa11.79□□□□□ -0.52
CNOT9-206ENST00000473626 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
CNOT9-206ENST00000473626 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
CNOT9-206ENST00000473626 SLF2Q8IX21 1173 aa11.77□□□□□ -0.53
CNOT9-206ENST00000473626 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
CNOT9-206ENST00000473626 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
CNOT9-206ENST00000473626 PCDH10Q9P2E7 1040 aa11.74□□□□□ -0.53
CNOT9-206ENST00000473626 THSD4Q6ZMP0 1018 aa11.73□□□□□ -0.53
CNOT9-206ENST00000473626 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
CNOT9-206ENST00000473626 CFHP08603 1231 aa11.72□□□□□ -0.53
CNOT9-206ENST00000473626 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
CNOT9-206ENST00000473626 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
CNOT9-206ENST00000473626 GCGRP47871 477 aa11.71□□□□□ -0.53
CNOT9-206ENST00000473626 PTPN5P54829 565 aa11.71□□□□□ -0.53
CNOT9-206ENST00000473626 PPP4CP60510 307 aa11.71□□□□□ -0.53
CNOT9-206ENST00000473626 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
CNOT9-206ENST00000473626 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
CNOT9-206ENST00000473626 TBC1D2Q9BYX2 928 aa11.7□□□□□ -0.54
CNOT9-206ENST00000473626 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
CNOT9-206ENST00000473626 HLA-CQ95604 372 aa11.69□□□□□ -0.54
CNOT9-206ENST00000473626 APLP1P51693 650 aa11.68□□□□□ -0.54
CNOT9-206ENST00000473626 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
CNOT9-206ENST00000473626 RSPH4AQ5TD94 716 aa11.68□□□□□ -0.54
CNOT9-206ENST00000473626 KDM4AO75164 1064 aa11.67□□□□□ -0.54
CNOT9-206ENST00000473626 NDUFV2P19404 249 aa11.67□□□□□ -0.54
CNOT9-206ENST00000473626 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
CNOT9-206ENST00000473626 POLR3EQ9NVU0 708 aa11.67□□□□□ -0.54
CNOT9-206ENST00000473626 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
CNOT9-206ENST00000473626 FUT2Q10981 343 aa11.66□□□□□ -0.54
CNOT9-206ENST00000473626 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
CNOT9-206ENST00000473626 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
CNOT9-206ENST00000473626 PUS10Q3MIT2 529 aaKnown RBP11.65□□□□□ -0.54
CNOT9-206ENST00000473626 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
CNOT9-206ENST00000473626 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
CNOT9-206ENST00000473626 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
CNOT9-206ENST00000473626 LIMD1Q9UGP4 676 aa11.62□□□□□ -0.55
CNOT9-206ENST00000473626 HOXA2O43364 376 aa11.61□□□□□ -0.55
CNOT9-206ENST00000473626 ACTN4O43707 911 aaKnown RBP11.61□□□□□ -0.55
CNOT9-206ENST00000473626 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
CNOT9-206ENST00000473626 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
CNOT9-206ENST00000473626 CSPP1Q1MSJ5 1256 aa11.6□□□□□ -0.55
CNOT9-206ENST00000473626 ATP1B4Q9UN42 357 aaPredicted RBP11.6□□□□□ -0.55
CNOT9-206ENST00000473626 RIC3Q7Z5B4 369 aa11.59□□□□□ -0.55
CNOT9-206ENST00000473626 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
CNOT9-206ENST00000473626 PCDHB15Q9Y5E8 787 aa11.59□□□□□ -0.55
CNOT9-206ENST00000473626 SKIV2LQ15477 1246 aaKnown RBP11.58□□□□□ -0.56
CNOT9-206ENST00000473626 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
CNOT9-206ENST00000473626 RSBN1LQ6PCB5 846 aaPredicted RBP11.58□□□□□ -0.56
CNOT9-206ENST00000473626 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
CNOT9-206ENST00000473626 ATP6V1AP38606 617 aa11.57□□□□□ -0.56
CNOT9-206ENST00000473626 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
CNOT9-206ENST00000473626 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
CNOT9-206ENST00000473626 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
CNOT9-206ENST00000473626 COPS2P61201 443 aa11.56□□□□□ -0.56
CNOT9-206ENST00000473626 MORN1Q5T089 497 aa11.56□□□□□ -0.56
CNOT9-206ENST00000473626 BLOC1S3Q6QNY0 202 aa11.56□□□□□ -0.56
CNOT9-206ENST00000473626 PCDHB3Q9Y5E6 796 aa11.56□□□□□ -0.56
CNOT9-206ENST00000473626 SPTLC1O15269 473 aa11.55□□□□□ -0.56
CNOT9-206ENST00000473626 FDX1P10109 184 aa11.55□□□□□ -0.56
CNOT9-206ENST00000473626 USP46P62068 366 aa11.55□□□□□ -0.56
CNOT9-206ENST00000473626 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
CNOT9-206ENST00000473626 SLC27A5Q9Y2P5 690 aa11.55□□□□□ -0.56
CNOT9-206ENST00000473626 CABLES1Q8TDN4 633 aa11.54□□□□□ -0.56
CNOT9-206ENST00000473626 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
CNOT9-206ENST00000473626 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
CNOT9-206ENST00000473626 QPCTQ16769 361 aa11.53□□□□□ -0.56
CNOT9-206ENST00000473626 PRR14Q9BWN1 585 aa11.53□□□□□ -0.56
CNOT9-206ENST00000473626 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
CNOT9-206ENST00000473626 GRIPAP1Q4V328 841 aa11.51□□□□□ -0.57
CNOT9-206ENST00000473626 MTRQ99707 1265 aa11.51□□□□□ -0.57
CNOT9-206ENST00000473626 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.51□□□□□ -0.57
CNOT9-206ENST00000473626 HCSTQ9UBK5 93 aa11.51□□□□□ -0.57
CNOT9-206ENST00000473626 RNF19BQ6ZMZ0 732 aa11.5□□□□□ -0.57
CNOT9-206ENST00000473626 SCUBE3Q8IX30 993 aa11.5□□□□□ -0.57
CNOT9-206ENST00000473626 ZNF516Q92618 1163 aa11.49□□□□□ -0.57
CNOT9-206ENST00000473626 RTL5Q5HYW3 569 aaPredicted RBP11.48□□□□□ -0.57
CNOT9-206ENST00000473626 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms