RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 RIMS2Q9UQ26 1411 aa22.58■■□□□ 1.21
SDCCAG3-209ENST00000468963 TMEM131LA2VDJ0 1609 aa22.58■■□□□ 1.21
SDCCAG3-209ENST00000468963 PROSER2Q86WR7 435 aaPredicted RBP22.58■■□□□ 1.21
SDCCAG3-209ENST00000468963 BCANQ96GW7 911 aa22.58■■□□□ 1.21
SDCCAG3-209ENST00000468963 TMEM94Q12767 1356 aa22.58■■□□□ 1.21
SDCCAG3-209ENST00000468963 E9PCH4 1651 aa22.58■■□□□ 1.2
SDCCAG3-209ENST00000468963 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
SDCCAG3-209ENST00000468963 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
SDCCAG3-209ENST00000468963 PLEKHG1Q9ULL1 1385 aa22.57■■□□□ 1.2
SDCCAG3-209ENST00000468963 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
SDCCAG3-209ENST00000468963 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
SDCCAG3-209ENST00000468963 RBM33Q96EV2 1170 aaKnown RBP22.55■■□□□ 1.2
SDCCAG3-209ENST00000468963 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
SDCCAG3-209ENST00000468963 TBX22Q9Y458 520 aa22.55■■□□□ 1.2
SDCCAG3-209ENST00000468963 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
SDCCAG3-209ENST00000468963 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
SDCCAG3-209ENST00000468963 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
SDCCAG3-209ENST00000468963 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
SDCCAG3-209ENST00000468963 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
SDCCAG3-209ENST00000468963 MED1Q15648 1581 aaPredicted RBP22.49■■□□□ 1.19
SDCCAG3-209ENST00000468963 NKTRP30414 1462 aaKnown RBP22.47■■□□□ 1.19
SDCCAG3-209ENST00000468963 ADAMTS13Q76LX8 1427 aa22.47■■□□□ 1.19
SDCCAG3-209ENST00000468963 CHD2O14647 1828 aaKnown RBP22.46■■□□□ 1.19
SDCCAG3-209ENST00000468963 NAIPQ13075 1403 aa22.45■■□□□ 1.18
SDCCAG3-209ENST00000468963 SLAIN2Q9P270 581 aa22.42■■□□□ 1.18
SDCCAG3-209ENST00000468963 MSH6P52701 1360 aa22.41■■□□□ 1.18
SDCCAG3-209ENST00000468963 PIK3R4Q99570 1358 aa22.41■■□□□ 1.18
SDCCAG3-209ENST00000468963 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
SDCCAG3-209ENST00000468963 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
SDCCAG3-209ENST00000468963 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
SDCCAG3-209ENST00000468963 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
SDCCAG3-209ENST00000468963 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
SDCCAG3-209ENST00000468963 DIP2AQ14689 1571 aa22.36■■□□□ 1.17
SDCCAG3-209ENST00000468963 PTPRUQ92729 1446 aa22.35■■□□□ 1.17
SDCCAG3-209ENST00000468963 HFM1A2PYH4 1435 aa22.34■■□□□ 1.17
SDCCAG3-209ENST00000468963 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
SDCCAG3-209ENST00000468963 C19orf44Q9H6X5 657 aa22.34■■□□□ 1.17
SDCCAG3-209ENST00000468963 TRIM52Q96A61 297 aa22.33■■□□□ 1.17
SDCCAG3-209ENST00000468963 RGS17Q9UGC6 210 aaPredicted RBP22.33■■□□□ 1.17
SDCCAG3-209ENST00000468963 C14orf37Q86TY3 774 aa22.31■■□□□ 1.16
SDCCAG3-209ENST00000468963 TRPM2O94759 1503 aa22.31■■□□□ 1.16
SDCCAG3-209ENST00000468963 CADPS2Q86UW7 1296 aa22.3■■□□□ 1.16
SDCCAG3-209ENST00000468963 CLTCL1P53675 1640 aa22.29■■□□□ 1.16
SDCCAG3-209ENST00000468963 SETBP1Q9Y6X0 1596 aa22.29■■□□□ 1.16
SDCCAG3-209ENST00000468963 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
SDCCAG3-209ENST00000468963 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
SDCCAG3-209ENST00000468963 METP08581 1390 aa22.27■■□□□ 1.16
SDCCAG3-209ENST00000468963 ATF3P18847 181 aa22.27■■□□□ 1.16
SDCCAG3-209ENST00000468963 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.25■■□□□ 1.15
SDCCAG3-209ENST00000468963 NEXMIFQ5QGS0 1516 aa22.25■■□□□ 1.15
SDCCAG3-209ENST00000468963 VGFO15240 615 aaPredicted RBP22.23■■□□□ 1.15
SDCCAG3-209ENST00000468963 RPGRIP1LQ68CZ1 1315 aa22.22■■□□□ 1.15
SDCCAG3-209ENST00000468963 KIF1BO60333 1816 aa22.22■■□□□ 1.15
SDCCAG3-209ENST00000468963 JCADQ9P266 1359 aa22.21■■□□□ 1.15
SDCCAG3-209ENST00000468963 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
SDCCAG3-209ENST00000468963 XRN1Q8IZH2 1706 aaKnown RBP22.2■■□□□ 1.14
SDCCAG3-209ENST00000468963 FOXD1Q16676 465 aa22.19■■□□□ 1.14
SDCCAG3-209ENST00000468963 POTEAQ6S8J7 498 aa22.18■■□□□ 1.14
SDCCAG3-209ENST00000468963 BRINP3Q76B58 766 aa22.18■■□□□ 1.14
SDCCAG3-209ENST00000468963 DCCP43146 1447 aa22.17■■□□□ 1.14
SDCCAG3-209ENST00000468963 MPHOSPH9Q99550 1183 aa22.16■■□□□ 1.14
SDCCAG3-209ENST00000468963 COL16A1Q07092 1604 aaPredicted RBP22.16■■□□□ 1.14
SDCCAG3-209ENST00000468963 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
SDCCAG3-209ENST00000468963 MST1RQ04912 1400 aa22.13■■□□□ 1.13
SDCCAG3-209ENST00000468963 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
SDCCAG3-209ENST00000468963 ADGRL3Q9HAR2 1447 aa22.11■■□□□ 1.13
SDCCAG3-209ENST00000468963 ROBO2Q9HCK4 1378 aa22.09■■□□□ 1.13
SDCCAG3-209ENST00000468963 SETD1AO15047 1707 aaKnown RBP22.08■■□□□ 1.12
SDCCAG3-209ENST00000468963 ADGRF5Q8IZF2 1346 aa22.07■■□□□ 1.12
SDCCAG3-209ENST00000468963 RGL3Q3MIN7 710 aa22.07■■□□□ 1.12
SDCCAG3-209ENST00000468963 PPLO60437 1756 aa22.07■■□□□ 1.12
SDCCAG3-209ENST00000468963 PTCH1Q13635 1447 aa22.06■■□□□ 1.12
SDCCAG3-209ENST00000468963 SPATA31E1Q6ZUB1 1445 aa22.06■■□□□ 1.12
SDCCAG3-209ENST00000468963 ASXL1Q8IXJ9 1541 aa22.06■■□□□ 1.12
SDCCAG3-209ENST00000468963 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
SDCCAG3-209ENST00000468963 PRAG1Q86YV5 1406 aa22.06■■□□□ 1.12
SDCCAG3-209ENST00000468963 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
SDCCAG3-209ENST00000468963 LRP6O75581 1613 aa22.05■■□□□ 1.12
SDCCAG3-209ENST00000468963 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
SDCCAG3-209ENST00000468963 DDX17Q92841 729 aaKnown RBP22.03■■□□□ 1.12
SDCCAG3-209ENST00000468963 LRRC59Q96AG4 307 aaKnown RBP22.03■■□□□ 1.12
SDCCAG3-209ENST00000468963 NALCNQ8IZF0 1738 aa22.02■■□□□ 1.12
SDCCAG3-209ENST00000468963 C1orf167Q5SNV9 1468 aa22.02■■□□□ 1.12
SDCCAG3-209ENST00000468963 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
SDCCAG3-209ENST00000468963 ANKRD30BQ9BXX2 1392 aa22■■□□□ 1.11
SDCCAG3-209ENST00000468963 MEX3CQ5U5Q3 659 aaKnown RBP22■■□□□ 1.11
SDCCAG3-209ENST00000468963 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
SDCCAG3-209ENST00000468963 ORAI2Q96SN7 254 aa21.99■■□□□ 1.11
SDCCAG3-209ENST00000468963 NUTM2BA6NNL0 878 aaPredicted RBP21.98■■□□□ 1.11
SDCCAG3-209ENST00000468963 NUTM2EB1AL46 878 aaPredicted RBP21.98■■□□□ 1.11
SDCCAG3-209ENST00000468963 ZNF772Q68DY9 489 aaPredicted RBP21.98■■□□□ 1.11
SDCCAG3-209ENST00000468963 NUTM2AQ8IVF1 878 aaPredicted RBP21.98■■□□□ 1.11
SDCCAG3-209ENST00000468963 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
SDCCAG3-209ENST00000468963 STK26Q9P289 416 aa21.95■■□□□ 1.1
SDCCAG3-209ENST00000468963 ABCC11Q96J66 1382 aa21.95■■□□□ 1.1
SDCCAG3-209ENST00000468963 WAPLQ7Z5K2 1190 aa21.94■■□□□ 1.1
SDCCAG3-209ENST00000468963 SOS2Q07890 1332 aaPredicted RBP21.94■■□□□ 1.1
SDCCAG3-209ENST00000468963 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
SDCCAG3-209ENST00000468963 PNPLA6Q8IY17 1366 aa21.93■■□□□ 1.1
SDCCAG3-209ENST00000468963 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms