RNA–Protein interactions for RNA: ENST00000415910.2

LINC01661-201, Transcript of long intergenic non-protein coding RNA 1661, humanhuman

TSL 3 BASIC

Gene LINC01661, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01661-201ENST00000415910 ANKK1Q8NFD2 765 aa10.09□□□□□ -0.79
LINC01661-201ENST00000415910 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
LINC01661-201ENST00000415910 SAMD7Q7Z3H4 446 aa10.08□□□□□ -0.8
LINC01661-201ENST00000415910 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
LINC01661-201ENST00000415910 WNT2BQ93097 391 aa10.08□□□□□ -0.8
LINC01661-201ENST00000415910 SPNS2Q8IVW8 549 aa10.07□□□□□ -0.8
LINC01661-201ENST00000415910 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
LINC01661-201ENST00000415910 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
LINC01661-201ENST00000415910 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
LINC01661-201ENST00000415910 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.06□□□□□ -0.8
LINC01661-201ENST00000415910 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
LINC01661-201ENST00000415910 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
LINC01661-201ENST00000415910 SLF2Q8IX21 1173 aa10.05□□□□□ -0.8
LINC01661-201ENST00000415910 RNF40O75150 1001 aa10.04□□□□□ -0.8
LINC01661-201ENST00000415910 SULF1Q8IWU6 871 aa10.04□□□□□ -0.8
LINC01661-201ENST00000415910 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
LINC01661-201ENST00000415910 GTF3C3Q9Y5Q9 886 aa10.04□□□□□ -0.8
LINC01661-201ENST00000415910 NEUROD2Q15784 382 aa10.03□□□□□ -0.8
LINC01661-201ENST00000415910 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
LINC01661-201ENST00000415910 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
LINC01661-201ENST00000415910 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.81
LINC01661-201ENST00000415910 GIGYF2Q6Y7W6 1299 aaKnown RBP10.02□□□□□ -0.81
LINC01661-201ENST00000415910 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
LINC01661-201ENST00000415910 BCAMP50895 628 aa10.01□□□□□ -0.81
LINC01661-201ENST00000415910 TMUB1Q9BVT8 246 aa10.01□□□□□ -0.81
LINC01661-201ENST00000415910 SSTR3P32745 418 aaPredicted RBP10□□□□□ -0.81
LINC01661-201ENST00000415910 PPP4CP60510 307 aa10□□□□□ -0.81
LINC01661-201ENST00000415910 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
LINC01661-201ENST00000415910 BRPF1P55201 1214 aaPredicted RBP9.99□□□□□ -0.81
LINC01661-201ENST00000415910 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
LINC01661-201ENST00000415910 RDH13Q8NBN7 331 aa9.99□□□□□ -0.81
LINC01661-201ENST00000415910 RNF166Q96A37 237 aaPredicted RBP9.99□□□□□ -0.81
LINC01661-201ENST00000415910 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
LINC01661-201ENST00000415910 FAM217BQ9NTX9 383 aaPredicted RBP9.99□□□□□ -0.81
LINC01661-201ENST00000415910 TSR3Q9UJK0 312 aaKnown RBP9.99□□□□□ -0.81
LINC01661-201ENST00000415910 HPS5Q9UPZ3 1129 aa9.99□□□□□ -0.81
LINC01661-201ENST00000415910 KDM4CQ9H3R0 1056 aa9.98□□□□□ -0.81
LINC01661-201ENST00000415910 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.82
LINC01661-201ENST00000415910 PTPN5P54829 565 aa9.96□□□□□ -0.82
LINC01661-201ENST00000415910 SLC10A3P09131 477 aa9.94□□□□□ -0.82
LINC01661-201ENST00000415910 CD46P15529 392 aa9.94□□□□□ -0.82
LINC01661-201ENST00000415910 MMRN1Q13201 1228 aa9.94□□□□□ -0.82
LINC01661-201ENST00000415910 MS4A1P11836 297 aa9.93□□□□□ -0.82
LINC01661-201ENST00000415910 KMT5BQ4FZB7 885 aa9.93□□□□□ -0.82
LINC01661-201ENST00000415910 BEGAINQ9BUH8 593 aa9.93□□□□□ -0.82
LINC01661-201ENST00000415910 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
LINC01661-201ENST00000415910 WBP1LQ9NX94 342 aa9.93□□□□□ -0.82
LINC01661-201ENST00000415910 CFHP08603 1231 aa9.92□□□□□ -0.82
LINC01661-201ENST00000415910 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
LINC01661-201ENST00000415910 HCSTQ9UBK5 93 aa9.92□□□□□ -0.82
LINC01661-201ENST00000415910 GCGRP47871 477 aa9.91□□□□□ -0.82
LINC01661-201ENST00000415910 DDRGK1Q96HY6 314 aa9.91□□□□□ -0.82
LINC01661-201ENST00000415910 NUTM1Q86Y26 1132 aa9.9□□□□□ -0.82
LINC01661-201ENST00000415910 DIXDC1Q155Q3 683 aa9.88□□□□□ -0.83
LINC01661-201ENST00000415910 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
LINC01661-201ENST00000415910 KDM4AO75164 1064 aa9.87□□□□□ -0.83
LINC01661-201ENST00000415910 APLP1P51693 650 aa9.87□□□□□ -0.83
LINC01661-201ENST00000415910 IL27Q8NEV9 243 aa9.87□□□□□ -0.83
LINC01661-201ENST00000415910 ACTN4O43707 911 aaKnown RBP9.86□□□□□ -0.83
LINC01661-201ENST00000415910 GRIPAP1Q4V328 841 aa9.86□□□□□ -0.83
LINC01661-201ENST00000415910 USP46P62068 366 aa9.85□□□□□ -0.83
LINC01661-201ENST00000415910 RSPH6AQ9H0K4 717 aa9.85□□□□□ -0.83
LINC01661-201ENST00000415910 FUT2Q10981 343 aa9.84□□□□□ -0.83
LINC01661-201ENST00000415910 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
LINC01661-201ENST00000415910 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
LINC01661-201ENST00000415910 ATP6V1AP38606 617 aa9.83□□□□□ -0.84
LINC01661-201ENST00000415910 SPIRE2Q8WWL2 714 aa9.83□□□□□ -0.84
LINC01661-201ENST00000415910 TBC1D2Q9BYX2 928 aa9.83□□□□□ -0.84
LINC01661-201ENST00000415910 PLEKHG3A1L390 1219 aa9.81□□□□□ -0.84
LINC01661-201ENST00000415910 HOXA2O43364 376 aa9.79□□□□□ -0.84
LINC01661-201ENST00000415910 PUS10Q3MIT2 529 aaKnown RBP9.79□□□□□ -0.84
LINC01661-201ENST00000415910 ATP1B4Q9UN42 357 aaPredicted RBP9.79□□□□□ -0.84
LINC01661-201ENST00000415910 NR1I2O75469 434 aa9.78□□□□□ -0.84
LINC01661-201ENST00000415910 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
LINC01661-201ENST00000415910 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.85
LINC01661-201ENST00000415910 COPS2P61201 443 aa9.77□□□□□ -0.85
LINC01661-201ENST00000415910 MORN1Q5T089 497 aa9.77□□□□□ -0.85
LINC01661-201ENST00000415910 MYSM1Q5VVJ2 828 aa9.77□□□□□ -0.85
LINC01661-201ENST00000415910 SKIV2LQ15477 1246 aaKnown RBP9.76□□□□□ -0.85
LINC01661-201ENST00000415910 SH3D19Q5HYK7 790 aa9.76□□□□□ -0.85
LINC01661-201ENST00000415910 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
LINC01661-201ENST00000415910 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
LINC01661-201ENST00000415910 MTRQ99707 1265 aa9.76□□□□□ -0.85
LINC01661-201ENST00000415910 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
LINC01661-201ENST00000415910 FDX1P10109 184 aa9.75□□□□□ -0.85
LINC01661-201ENST00000415910 NDUFV2P19404 249 aa9.75□□□□□ -0.85
LINC01661-201ENST00000415910 GJA5P36382 358 aa9.75□□□□□ -0.85
LINC01661-201ENST00000415910 SCUBE3Q8IX30 993 aa9.75□□□□□ -0.85
LINC01661-201ENST00000415910 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
LINC01661-201ENST00000415910 SLC27A5Q9Y2P5 690 aa9.75□□□□□ -0.85
LINC01661-201ENST00000415910 SPTLC1O15269 473 aa9.74□□□□□ -0.85
LINC01661-201ENST00000415910 Q3C1V9 767 aa9.74□□□□□ -0.85
LINC01661-201ENST00000415910 RSBN1LQ6PCB5 846 aaPredicted RBP9.74□□□□□ -0.85
LINC01661-201ENST00000415910 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
LINC01661-201ENST00000415910 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
LINC01661-201ENST00000415910 TJAP1Q5JTD0 557 aa9.73□□□□□ -0.85
LINC01661-201ENST00000415910 C14orf37Q86TY3 774 aa9.73□□□□□ -0.85
LINC01661-201ENST00000415910 HLA-CQ95604 372 aa9.73□□□□□ -0.85
LINC01661-201ENST00000415910 PCMTD1Q96MG8 357 aaPredicted RBP9.73□□□□□ -0.85
LINC01661-201ENST00000415910 ZPR1O75312 459 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms