RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
CCDC85C-201ENST00000380243 STK31Q9BXU1 1019 aa12.69□□□□□ -0.38
CCDC85C-201ENST00000380243 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
CCDC85C-201ENST00000380243 RABEP1Q15276 862 aa12.69□□□□□ -0.38
CCDC85C-201ENST00000380243 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
CCDC85C-201ENST00000380243 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
CCDC85C-201ENST00000380243 PANK3Q9H999 370 aa12.68□□□□□ -0.38
CCDC85C-201ENST00000380243 BICD2Q8TD16 824 aa12.68□□□□□ -0.38
CCDC85C-201ENST00000380243 CLSTN1O94985 981 aa12.68□□□□□ -0.38
CCDC85C-201ENST00000380243 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
CCDC85C-201ENST00000380243 PRPF40AO75400 957 aaKnown RBP12.68□□□□□ -0.38
CCDC85C-201ENST00000380243 ANKRD20A12PQ8NF67 263 aa12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 KIAA0754O94854 1291 aa12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 DHX8Q14562 1220 aaKnown RBP12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 HOOK1Q9UJC3 728 aaKnown RBP12.67□□□□□ -0.38
CCDC85C-201ENST00000380243 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 DZIP1LQ8IYY4 767 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 DDX19BQ9UMR2 479 aa12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 CDC45O75419 566 aa12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
CCDC85C-201ENST00000380243 MCM5P33992 734 aa12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 RILPL2Q969X0 211 aa12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 GORABQ5T7V8 394 aa12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 ZKSCAN1P17029 563 aaPredicted RBP12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 CEP89Q96ST8 783 aa12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 PLCD4Q9BRC7 762 aa12.65□□□□□ -0.38
CCDC85C-201ENST00000380243 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 SOGA1O94964 1423 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 ABCC9O60706 1549 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 CBX1P83916 185 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 TIGD1Q96MW7 591 aa12.64□□□□□ -0.39
CCDC85C-201ENST00000380243 RUFY2Q8WXA3 655 aa12.63□□□□□ -0.39
CCDC85C-201ENST00000380243 PPP4R3BQ5MIZ7 849 aa12.63□□□□□ -0.39
CCDC85C-201ENST00000380243 CAGE1Q8TC20 777 aa12.63□□□□□ -0.39
CCDC85C-201ENST00000380243 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
CCDC85C-201ENST00000380243 SMC2O95347 1197 aa12.62□□□□□ -0.39
CCDC85C-201ENST00000380243 CCDC192P0DO97 292 aa12.62□□□□□ -0.39
CCDC85C-201ENST00000380243 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
CCDC85C-201ENST00000380243 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
CCDC85C-201ENST00000380243 SDF4Q9BRK5 362 aa12.62□□□□□ -0.39
CCDC85C-201ENST00000380243 NAP1L1P55209 391 aaKnown RBP12.62□□□□□ -0.39
CCDC85C-201ENST00000380243 PANK1Q8TE04 598 aa12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 GIMAP7Q8NHV1 300 aa12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 FMN1Q68DA7 1419 aa12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 ST20-MTHFSA0A0A6YYL1 179 aa12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 MPNDQ8N594 471 aa12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 PDILTQ8N807 584 aa12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 SPC24Q8NBT2 197 aa12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 XPCQ01831 940 aaPredicted RBP12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 C11orf95C9JLR9 678 aaPredicted RBP12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 GTPBP4Q9BZE4 634 aaKnown RBP12.61□□□□□ -0.39
CCDC85C-201ENST00000380243 AXDND1Q5T1B0 1012 aaPredicted RBP12.6□□□□□ -0.39
CCDC85C-201ENST00000380243 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
CCDC85C-201ENST00000380243 PCMTD1Q96MG8 357 aaPredicted RBP12.6□□□□□ -0.39
CCDC85C-201ENST00000380243 HDGFL2Q7Z4V5 671 aaPredicted RBP12.6□□□□□ -0.39
CCDC85C-201ENST00000380243 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
CCDC85C-201ENST00000380243 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
CCDC85C-201ENST00000380243 MCM2P49736 904 aa12.59□□□□□ -0.39
CCDC85C-201ENST00000380243 KIF2AO00139 706 aaPredicted RBP12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 APAF1O14727 1248 aa12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 ERLIN1O75477 346 aa12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 PRM3Q9NNZ6 103 aa12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 SMG6Q86US8 1419 aaKnown RBP12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 OLFM4Q6UX06 510 aa12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 USP47Q96K76 1375 aa12.58□□□□□ -0.4
CCDC85C-201ENST00000380243 CLCN1P35523 988 aa12.57□□□□□ -0.4
CCDC85C-201ENST00000380243 DNAJC2Q99543 621 aaKnown RBP12.57□□□□□ -0.4
CCDC85C-201ENST00000380243 AKAP17AQ02040 695 aaKnown RBP12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 GOLGA6L7A0A1B0GV03 622 aa12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 GTF2A1P52655 376 aaPredicted RBP12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 IPO4Q8TEX9 1081 aaKnown RBP12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 DYDC1Q8WWB3 177 aa12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 UBXN4Q92575 508 aa12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 GPATCH11Q8N954 259 aa12.56□□□□□ -0.4
CCDC85C-201ENST00000380243 GOLGA6L10A6NI86 522 aa12.55□□□□□ -0.4
CCDC85C-201ENST00000380243 ZRSR2Q15696 482 aaKnown RBP12.55□□□□□ -0.4
CCDC85C-201ENST00000380243 CPLX1O14810 134 aa12.55□□□□□ -0.4
CCDC85C-201ENST00000380243 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms