RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CACNA2D1P54289 1103 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 SURF1Q15526 300 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 HGSNATQ68CP4 663 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 MOXD1Q6UVY6 613 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 PDZD8Q8NEN9 1154 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 ARHGEF26Q96DR7 871 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 ADPGKQ9BRR6 497 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 UPF3AQ9H1J1 476 aaKnown RBP15.42■□□□□ 0.06
VPS36-207ENST00000611132 ASNSD1Q9NWL6 643 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 ARL4AP40617 200 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 CRKP46108 304 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 MTFR1Q15390 333 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 ACCSLQ4AC99 568 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 ZCWPW2Q504Y3 356 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 LMBRD2Q68DH5 695 aaPredicted RBP15.42■□□□□ 0.06
VPS36-207ENST00000611132 ZNF572Q7Z3I7 529 aaPredicted RBP15.42■□□□□ 0.06
VPS36-207ENST00000611132 CDHR1Q96JP9 859 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 TMEM8AQ9HCN3 771 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 STX1BP61266 288 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 PSMC1P62191 440 aaKnown RBP15.42■□□□□ 0.06
VPS36-207ENST00000611132 PSMC5P62195 406 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 GPSM2P81274 684 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
VPS36-207ENST00000611132 SPOPLQ6IQ16 392 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 MIS18BP1Q6P0N0 1132 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 SH2D3AQ9BRG2 576 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 TRIM33Q9UPN9 1127 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 CLRN2A0PK11 232 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 MSH4O15457 936 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 KRT76Q01546 638 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 NFX1Q12986 1120 aaKnown RBP15.41■□□□□ 0.06
VPS36-207ENST00000611132 MTM1Q13496 603 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 ARID3BQ8IVW6 561 aaPredicted RBP15.41■□□□□ 0.06
VPS36-207ENST00000611132 LARGE2Q8N3Y3 721 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 INPP5DQ92835 1189 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 HES6Q96HZ4 224 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 XPO7Q9UIA9 1087 aaKnown RBP15.41■□□□□ 0.06
VPS36-207ENST00000611132 ARHGAP23Q9P227 1491 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 NCALDP61601 193 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 TTLL12Q14166 644 aaPredicted RBP15.41■□□□□ 0.06
VPS36-207ENST00000611132 IRGCQ6NXR0 463 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 PRPF39Q86UA1 669 aaKnown RBP15.41■□□□□ 0.06
VPS36-207ENST00000611132 CATSPER1Q8NEC5 780 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 CYP39A1Q9NYL5 469 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 CORO1CQ9ULV4 474 aaPredicted RBP15.41■□□□□ 0.06
VPS36-207ENST00000611132 FAM208AQ9UK61 1670 aaKnown RBP15.41■□□□□ 0.06
VPS36-207ENST00000611132 KPNA7A9QM74 516 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 MFN1Q8IWA4 741 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 OLFML3Q9NRN5 406 aa15.41■□□□□ 0.06
VPS36-207ENST00000611132 TLR2O60603 784 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 PSMC6P62333 389 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 RRP1BQ14684 758 aaKnown RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 LRP10Q7Z4F1 713 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 JDP2Q8WYK2 163 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 E2F7Q96AV8 911 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 NINJ2Q9NZG7 142 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 PNMA3Q9UL41 463 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 MST1RQ04912 1400 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 PABPN1LA6NDY0 278 aaKnown RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 INO80B-WBP1J3KQ70 363 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 KRT10P13645 584 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 FOXR2Q6PJQ5 311 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 ACAD11Q709F0 780 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 IRF2BP2Q7Z5L9 587 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 KRT35Q92764 455 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 GFM2Q969S9 779 aaKnown RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 DNAJC19Q96DA6 116 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 FAM111AQ96PZ2 611 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 APOL6Q9BWW8 343 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 INO80BQ9C086 356 aaPredicted RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 SIGLEC1Q9BZZ2 1709 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 SMAPO00193 183 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 SPAG6O75602 509 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 KLHL2O95198 593 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 CBX6O95503 412 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 CYP11B1P15538 503 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 BCAR1P56945 870 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 CCNG2Q16589 344 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 ZNF677Q86XU0 584 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 KCNK16Q96T55 309 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 TIPINQ9BVW5 301 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 NYAP2Q9P242 653 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 SLC24A2Q9UI40 661 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 NDUFB10O96000 172 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 KRT16P08779 473 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 ATP4AP20648 1035 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 SLC34A1Q06495 639 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 IFRD2Q12894 506 aaPredicted RBP15.4■□□□□ 0.06
VPS36-207ENST00000611132 ZNF667Q5HYK9 610 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 PPIL6Q8IXY8 311 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 PCYOX1Q9UHG3 505 aa15.4■□□□□ 0.06
VPS36-207ENST00000611132 PSTPIP1O43586 416 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 WEE2P0C1S8 567 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 SFNP31947 248 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 EXOC3L1Q86VI1 746 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 SLC5A5Q92911 643 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 MMTAG2Q9BU76 263 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms