RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 LMO7Q8WWI1 1683 aa4.73□□□□□ -1.65
CKS1BP3-201ENST00000600888 ACEP12821 1306 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 EVC2Q86UK5 1308 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 CLSPNQ9HAW4 1339 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 PPIP5K1Q6PFW1 1433 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 SSH2Q76I76 1423 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 C1QTNF3-AMACRE9PGA6 284 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 IPO13O94829 963 aaKnown RBP4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 ENDOD1O94919 500 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 SREBF1P36956 1147 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 RECQLP46063 649 aaPredicted RBP4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 VPS72Q15906 364 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 FAM47AQ5JRC9 791 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 MFSD14BQ5SR56 506 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 PRAMEF14Q5SWL7 426 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 FAM83AQ86UY5 434 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 XYLT1Q86Y38 959 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 TRMT2AQ8IZ69 625 aaKnown RBP4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 PQLC1Q8N2U9 271 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 OR2I1PQ8NGU4 316 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 CHMP4CQ96CF2 233 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 PUS7Q96PZ0 661 aaKnown RBP4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 CEP89Q96ST8 783 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 CPPED1Q9BRF8 314 aaPredicted RBP4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 PDCD2LQ9BRP1 358 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 SIK3Q9Y2K2 1263 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 GIT1Q9Y2X7 761 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 TONSLQ96HA7 1378 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 PIK3C2AO00443 1686 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 COL18A1P39060 1754 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 RGPD5Q99666 1765 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 EP400Q96L91 3159 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 SLIT3O75094 1523 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 USP6P35125 1406 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 CPSF1Q10570 1443 aaKnown RBP4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 USP19O94966 1318 aa4.72□□□□□ -1.65
CKS1BP3-201ENST00000600888 THSD7AQ9UPZ6 1657 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 CPDO75976 1380 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 FAM171A2A8MVW0 826 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 ALDH1L1O75891 902 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 SNUPNO95149 360 aaKnown RBP4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 HSP90B1P14625 803 aaKnown RBP4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 ACRV1P26436 265 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 SLC6A9P48067 706 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 SCNN1GP51170 649 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 NEK2P51955 445 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 RABGGTBP53611 331 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 SLC16A1P53985 500 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 METTL24Q5JXM2 366 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 SPDYAQ5MJ70 313 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 C1QL3Q5VWW1 255 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 ANKS6Q68DC2 871 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 Q6ZRM9 215 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 DOK3Q7L591 496 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 ZNF572Q7Z3I7 529 aaPredicted RBP4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 ZBTB46Q86UZ6 589 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 MB21D1Q8N884 522 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 SH3RF3Q8TEJ3 882 aaPredicted RBP4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 ATXN2LQ8WWM7 1075 aaKnown RBP4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 STON2Q8WXE9 905 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 EXTL1Q92935 676 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 CEP95Q96GE4 821 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 UHRF1Q96T88 793 aaPredicted RBP4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 C7orf25Q9BPX7 421 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 SAP30BPQ9UHR5 308 aaKnown RBP4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 HDAC5Q9UQL6 1122 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 WNK3Q9BYP7 1800 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 XDHP47989 1333 aa4.71□□□□□ -1.66
CKS1BP3-201ENST00000600888 ATRNL1Q5VV63 1379 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 RGPD1P0DJD0 1748 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 PARP4Q9UKK3 1724 aaKnown RBP4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 TBKBP1A7MCY6 615 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 WNT10BO00744 389 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 INSRRP14616 1297 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 IL2RBP14784 551 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 HK1P19367 917 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 EDNRBP24530 442 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 GUCY1A2P33402 732 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 MAN2A2P49641 1150 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 FLT3LGP49771 235 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 ADKP55263 362 aaKnown RBP4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 KIF23Q02241 960 aaPredicted RBP4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 RRP1BQ14684 758 aaKnown RBP4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 USP39Q53GS9 565 aaKnown RBP4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 HTR3DQ70Z44 454 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 GPRIN1Q7Z2K8 1008 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 SPRED1Q7Z699 444 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 C1orf210Q8IVY1 113 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 FBXO18Q8NFZ0 1043 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 OR52N2Q8NGI0 321 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 COA7Q96BR5 231 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 CYFIP2Q96F07 1278 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 MNTQ99583 582 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 GPR87Q9BY21 358 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 CPEB1Q9BZB8 566 aaKnown RBP4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 KCNH6Q9H252 994 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 LDAHQ9H6V9 325 aa4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 AURKAIP1Q9NWT8 199 aaPredicted RBP4.7□□□□□ -1.66
CKS1BP3-201ENST00000600888 LIMCH1Q9UPQ0 1083 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms