RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 PNOCQ13519 176 aa18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 CLUL1Q15846 466 aa18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 LNX1Q8TBB1 728 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 HDAC7Q8WUI4 952 aa18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 SMARCE1Q969G3 411 aa18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 SUSD3Q96L08 255 aa18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 FBXL18Q96ME1 805 aa18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 R3HCC1Q9Y3T6 440 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-212ENST00000596163 EXOC3O60645 756 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 GADD45BO75293 160 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 TKTP29401 623 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 TFAMQ00059 246 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 MYBPC2Q14324 1141 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 SNRNP35Q16560 246 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 C9orf57Q5W0N0 161 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 CES5AQ6NT32 575 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 PRSS55Q6UWB4 352 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 DSTYKQ6XUX3 929 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 GUF1Q8N442 669 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 SMRP1Q8NCR6 262 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 ZSWIM2Q8NEG5 633 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 PCDHB8Q9UN66 801 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 BACE2Q9Y5Z0 518 aa18.7■□□□□ 0.58
SHKBP1-212ENST00000596163 I3L4J1 428 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 PIRO00625 290 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 MBTPS2O43462 519 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 PRPF40AO75400 957 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 TMEM191BP0C7N4 346 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 EPCAMP16422 314 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 PNPLA4P41247 253 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 GUCY2FP51841 1108 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 RBM10P98175 930 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 ITIH3Q06033 890 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 PALB2Q86YC2 1186 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 CBWD2Q8IUF1 395 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 SLC9A9Q8IVB4 645 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 ADAMTS19Q8TE59 1207 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 TMEM174Q8WUU8 243 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 ANKRD36BP1Q96IX9 119 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 FNBP1Q96RU3 617 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 OXCT2Q9BYC2 517 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 KCTD10Q9H3F6 313 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 PLEKHA4Q9H4M7 779 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 PDE11AQ9HCR9 933 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 MTRRQ9UBK8 725 aa18.69■□□□□ 0.58
SHKBP1-212ENST00000596163 CITO14578 2027 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 ANO9A1A5B4 782 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 M0QZQ0 153 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 TNNC2P02585 160 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 IGFBP6P24592 240 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 AARSP49588 968 aaKnown RBP eCLIP18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 TAF6P49848 677 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 LILRA4P59901 499 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 SMAD2Q15796 467 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 DUOXA2Q1HG44 320 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 VARS2Q5ST30 1063 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 SYCE2Q6PIF2 218 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 USP37Q86T82 979 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 EFCAB13Q8IY85 973 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 RDH13Q8NBN7 331 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 ZNF560Q96MR9 790 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 CLSTN3Q9BQT9 956 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 SFXN1Q9H9B4 322 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 PRKAG3Q9UGI9 489 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 ITGA11Q9UKX5 1188 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 TRAF3IP3Q9Y228 551 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 PCDHA5Q9Y5H7 936 aa18.68■□□□□ 0.58
SHKBP1-212ENST00000596163 DLL1O00548 723 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 RPL17P18621 184 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 RPL13P26373 211 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 RBP5P82980 135 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 RAB33AQ14088 237 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 PSMD6Q15008 389 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 SV2CQ496J9 727 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 ZNF658Q5TYW1 1059 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 ZNF280DQ6N043 979 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 CLEC17AQ6ZS10 378 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 WDR49Q8IV35 697 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 GLYCTKQ8IVS8 523 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 SPATA20Q8TB22 786 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 RIPOR3Q96MK2 946 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 GBP4Q96PP9 640 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 UHRF1Q96T88 793 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 S1PR5Q9H228 398 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 ADAM7Q9H2U9 754 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 INTS13Q9NVM9 706 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 DSEQ9UL01 958 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 FRMD4BQ9Y2L6 1034 aa18.67■□□□□ 0.58
SHKBP1-212ENST00000596163 TGM5O43548 720 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 NR3C1P04150 777 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 ODC1P11926 461 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 IL9P15248 144 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 TNNI1P19237 187 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 TYMPP19971 482 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 OR1D2P34982 312 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 MTHFRP42898 656 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 YWHAHQ04917 246 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 CYP24A1Q07973 514 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 MRPL58Q14197 206 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 CTXN3Q4LDR2 81 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms