RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 POSTNQ15063 836 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 ELMSAN1Q6PJG2 1045 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 CYP26C1Q6V0L0 522 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 MAGEF1Q9HAY2 307 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 ZDHHC7Q9NXF8 308 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 USTQ9Y2C2 406 aa24.25■■□□□ 1.47
GTF2F1-204ENST00000594965 ASIC1P78348 528 aa24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 KRT85P78386 507 aa24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 POU5F1Q01860 360 aaKnown RBP24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 EHHADHQ08426 723 aa24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 SMG7Q92540 1137 aaKnown RBP24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 PRKD2Q9BZL6 878 aa24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 ASB7Q9H672 318 aa24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 WDR6Q9NNW5 1121 aaKnown RBP24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 KCNH3Q9ULD8 1083 aa24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 TECTAO75443 2155 aa24.24■■□□□ 1.47
GTF2F1-204ENST00000594965 M0QZQ0 153 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 XPOTO43592 962 aaKnown RBP24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 HOXD13P35453 343 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 AARSP49588 968 aaKnown RBP eCLIP24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 WNT7BP56706 349 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 SLC8B1Q6J4K2 584 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 CCDC149Q6ZUS6 474 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 ZDHHC14Q8IZN3 488 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 EDAQ92838 391 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 BLZF1Q9H2G9 400 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 DERAQ9Y315 318 aa24.23■■□□□ 1.47
GTF2F1-204ENST00000594965 N4BP1O75113 896 aaKnown RBP24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 GARTP22102 1010 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 ZXDAP98168 799 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 TMEM132DQ14C87 1099 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 UNC13DQ70J99 1090 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 EPM2AIP1Q7L775 607 aaPredicted RBP24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 EFCAB13Q8IY85 973 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 SYCP3Q8IZU3 236 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 TDRD5Q8NAT2 981 aaKnown RBP24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 BEST2Q8NFU1 509 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 SAAL1Q96ER3 474 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 SPATA32Q96LK8 384 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 CBWD1Q9BRT8 395 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 TMEM206Q9H813 350 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 SERTAD1Q9UHV2 236 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 PCDHB8Q9UN66 801 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 C2CD2Q9Y426 696 aa24.22■■□□□ 1.47
GTF2F1-204ENST00000594965 CLUHO75153 1309 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 PRR33A8MZF0 331 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 PIRO00625 290 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 ACTN4O43707 911 aaKnown RBP24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 C8AP07357 584 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 CMA1P23946 247 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 AFMP43652 599 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 ROR1Q01973 937 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 CUL4BQ13620 913 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 PTPN21Q16825 1174 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 C9orf57Q5W0N0 161 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 GRAMD1CQ8IYS0 662 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 FAM213AQ9BRX8 229 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 FBXL5Q9UKA1 691 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 HPSEQ9Y251 543 aa24.21■■□□□ 1.47
GTF2F1-204ENST00000594965 A0A1B0GVL5 298 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 ANO9A1A5B4 782 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 WDR27A2RRH5 827 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 H7C4K7 107 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 ABLIM3O94929 683 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 PFKFB1P16118 471 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 COL9A1P20849 921 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 BECN1Q14457 450 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 FAM26FQ5R3K3 315 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 LIN9Q5TKA1 542 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 PLCD3Q8N3E9 789 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 APPL2Q8NEU8 664 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 ZNF461Q8TAF7 563 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 ZNF507Q8TCN5 953 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 PCIF1Q9H4Z3 704 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 PIDD1Q9HB75 910 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 LIMD1Q9UGP4 676 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 RAPGEFL1Q9UHV5 662 aa24.2■■□□□ 1.46
GTF2F1-204ENST00000594965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 GOLGA8IPA6NC78 632 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 GOLGA8JA6NMD2 632 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 SPTLC1O15269 473 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 HNRNPA1P09651 372 aaKnown RBP eCLIP24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 SLFN14P0C7P3 912 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 HOXA9P31269 272 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 LILRA4P59901 499 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 UVSSAQ2YD98 709 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 CTXN3Q4LDR2 81 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 PPM1LQ5SGD2 360 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 OTOP3Q7RTS5 596 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 BRSK2Q8IWQ3 736 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 SLC7A14Q8TBB6 771 aa24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 PYM1Q9BRP8 204 aaKnown RBP24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 TIMM13Q9Y5L4 95 aaPredicted RBP24.19■■□□□ 1.46
GTF2F1-204ENST00000594965 EIF3DO15371 548 aaKnown RBP eCLIP24.18■■□□□ 1.46
GTF2F1-204ENST00000594965 CCL16O15467 120 aa24.18■■□□□ 1.46
GTF2F1-204ENST00000594965 KLRC4O43908 158 aa24.18■■□□□ 1.46
GTF2F1-204ENST00000594965 EXTL3O43909 919 aa24.18■■□□□ 1.46
GTF2F1-204ENST00000594965 IL18RAPO95256 599 aa24.18■■□□□ 1.46
GTF2F1-204ENST00000594965 LDHAP00338 332 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms