RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 INTS13Q9NVM9 706 aa13.65□□□□□ -0.22
RETREG3-203ENST00000585894 UNC80Q8N2C7 3258 aa13.65□□□□□ -0.23
RETREG3-203ENST00000585894 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 PIRO00625 290 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 MBD3O95983 291 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TNNI1P19237 187 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 CCNE1P24864 410 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 STIM1Q13586 685 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 DPCR1Q3MIW9 517 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 KIAA0319Q5VV43 1072 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 KIAA1841Q6NSI8 718 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TRIML1Q8N9V2 468 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 CGRRF1Q99675 332 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 DUSP9Q99956 384 aaKnown RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TLE6Q9H808 572 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 NGRNQ9NPE2 291 aaKnown RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 MRPL17Q9NRX2 175 aaKnown RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 CHST7Q9NS84 486 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TIMM13Q9Y5L4 95 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 ANO9A1A5B4 782 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 LILRB3O75022 631 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 KRT19P08727 400 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 CNPP09543 421 aaKnown RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 DSG1Q02413 1049 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 NFIL3Q16649 462 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 USP41Q3LFD5 358 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 LLGL2Q6P1M3 1020 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 WDR49Q8IV35 697 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 FAM186BQ8IYM0 893 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 CSGALNACT2Q8N6G5 542 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 DHTKD1Q96HY7 919 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-203ENST00000585894 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TSG101Q99816 390 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 TTPALQ9BTX7 342 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 FRMD4BQ9Y2L6 1034 aa13.64□□□□□ -0.23
RETREG3-203ENST00000585894 FGFR3P22607 806 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 RPL13P26373 211 aaKnown RBP13.63□□□□□ -0.23
RETREG3-203ENST00000585894 LILRA4P59901 499 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 MYBPC2Q14324 1141 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 DUSP6Q16828 381 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 C1orf220Q5T0J3 134 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 PDE12Q6L8Q7 609 aaKnown RBP13.63□□□□□ -0.23
RETREG3-203ENST00000585894 TTI2Q6NXR4 508 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 PARD3BQ8TEW8 1205 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 CACTINQ8WUQ7 758 aaKnown RBP13.63□□□□□ -0.23
RETREG3-203ENST00000585894 TMEM174Q8WUU8 243 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 ELMO3Q96BJ8 720 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 ANKRD36BP1Q96IX9 119 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 MED15Q96RN5 788 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 GTPBP4Q9BZE4 634 aaKnown RBP13.63□□□□□ -0.23
RETREG3-203ENST00000585894 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
RETREG3-203ENST00000585894 CETN3O15182 167 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 TEX28O15482 410 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 ADAM12O43184 909 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 CLASP2O75122 1294 aaKnown RBP13.62□□□□□ -0.23
RETREG3-203ENST00000585894 GLP2RO95838 553 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 TNNC2P02585 160 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 LRRC63Q05C16 580 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 DLX2Q07687 328 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-203ENST00000585894 ELAVL2Q12926 359 aaKnown RBP13.62□□□□□ -0.23
RETREG3-203ENST00000585894 PAK1Q13153 545 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 SURF1Q15526 300 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 PSMD5Q16401 504 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 DUOXA2Q1HG44 320 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 CAVIN1Q6NZI2 390 aaKnown RBP13.62□□□□□ -0.23
RETREG3-203ENST00000585894 RSPO2Q6UXX9 243 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-203ENST00000585894 DSTYKQ6XUX3 929 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-203ENST00000585894 TRAPPC11Q7Z392 1133 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 NT5DC4Q86YG4 428 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 LNX1Q8TBB1 728 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-203ENST00000585894 SUSD3Q96L08 255 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 KLHL5Q96PQ7 755 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 IRAK3Q9Y616 596 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 C5orf42Q9H799 3197 aa13.62□□□□□ -0.23
RETREG3-203ENST00000585894 TRAPPC3O43617 180 aa13.61□□□□□ -0.23
RETREG3-203ENST00000585894 CST3P01034 146 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-203ENST00000585894 EPCAMP16422 314 aa13.61□□□□□ -0.23
RETREG3-203ENST00000585894 PSMC2P35998 433 aaKnown RBP13.61□□□□□ -0.23
RETREG3-203ENST00000585894 AARSP49588 968 aaKnown RBP eCLIP13.61□□□□□ -0.23
RETREG3-203ENST00000585894 VAMP7P51809 220 aa13.61□□□□□ -0.23
RETREG3-203ENST00000585894 NLRP12P59046 1061 aa13.61□□□□□ -0.23
RETREG3-203ENST00000585894 FKBP3Q00688 224 aaKnown RBP13.61□□□□□ -0.23
RETREG3-203ENST00000585894 TFF2Q03403 129 aa13.61□□□□□ -0.23
RETREG3-203ENST00000585894 BFSP1Q12934 665 aa13.61□□□□□ -0.23
RETREG3-203ENST00000585894 VARS2Q5ST30 1063 aaKnown RBP13.61□□□□□ -0.23
RETREG3-203ENST00000585894 CCDC183Q5T5S1 534 aa13.61□□□□□ -0.23
RETREG3-203ENST00000585894 TDRD10Q5VZ19 366 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms