RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 RNF149Q8NC42 400 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 LPPQ93052 612 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 MYO19Q96H55 970 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 TMEM169Q96HH4 297 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 HSD17B14Q9BPX1 270 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 TTC12Q9H892 705 aaPredicted RBP8.7□□□□□ -1.02
SRSF1-203ENST00000581497 ANKEF1Q9NU02 776 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 AGPAT5Q9NUQ2 364 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 RAPGEFL1Q9UHV5 662 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 LIMCH1Q9UPQ0 1083 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 USP15Q9Y4E8 981 aaPredicted RBP8.7□□□□□ -1.02
SRSF1-203ENST00000581497 PCDHB2Q9Y5E7 798 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 NLRC5Q86WI3 1866 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 MUC3AQ02505 3323 aa8.7□□□□□ -1.02
SRSF1-203ENST00000581497 REV3LO60673 3130 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 NT5C1B-RDH14C9J2C7 533 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 ZBTB39O15060 712 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 MMP20O60882 483 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 OFD1O75665 1012 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 ERLIN2O94905 339 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 HOXB8P17481 243 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-203ENST00000581497 AXLP30530 894 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 SOX18P35713 384 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 TECP42680 631 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 PTENP60484 403 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 POU5F1BQ06416 359 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 NCBP1Q09161 790 aaKnown RBP8.69□□□□□ -1.02
SRSF1-203ENST00000581497 GIT2Q14161 759 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 TFDP1Q14186 410 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 LONRF3Q496Y0 759 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 HERC4Q5GLZ8 1057 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-203ENST00000581497 ANKRD54Q6NXT1 300 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 MRPL10Q7Z7H8 261 aaKnown RBP8.69□□□□□ -1.02
SRSF1-203ENST00000581497 ZDHHC13Q8IUH4 622 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 RGL4Q8IZJ4 473 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 MRPL43Q8N983 215 aaKnown RBP8.69□□□□□ -1.02
SRSF1-203ENST00000581497 TMEM87AQ8NBN3 555 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 CNNM3Q8NE01 707 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 VN1R2Q8NFZ6 395 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 URGCPQ8TCY9 931 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 CASP10Q92851 521 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 FAM122AQ96E09 287 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 MTMR9Q96QG7 549 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 LLPHQ9BRT6 129 aaKnown RBP8.69□□□□□ -1.02
SRSF1-203ENST00000581497 PHF7Q9BWX1 381 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-203ENST00000581497 MUC3BQ9H195 1237 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 MINDY3Q9H8M7 445 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 RSAD1Q9HA92 442 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 UBN1Q9NPG3 1134 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 TBC1D13Q9NVG8 400 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 KANSL3Q9P2N6 904 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 STK39Q9UEW8 545 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 TRIM33Q9UPN9 1127 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 INPP5FQ9Y2H2 1132 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
SRSF1-203ENST00000581497 MYH9P35579 1960 aaKnown RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 EVPLQ92817 2033 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 MYO7AQ13402 2215 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 MEIS3P2A8K0S8 358 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 HIDE1A8MVS5 230 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 LOC730098B7Z3J9 87 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 CXCL14O95715 111 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 GALTP07902 379 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 XRCC6P12956 609 aaKnown RBP eCLIP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 NCLP19338 710 aaKnown RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 ATP2B1P20020 1258 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 HOXA11P31270 313 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 MCM7P33993 719 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 CA8P35219 290 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 HMGN5P82970 282 aaKnown RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 RBM10P98175 930 aaKnown RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 ORC2Q13416 577 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 KCNC3Q14003 757 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 LLGL2Q6P1M3 1020 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 NOTUMQ6P988 496 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 AGMOQ6ZNB7 445 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 DDX53Q86TM3 631 aaKnown RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 CCDC83Q8IWF9 413 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 VPS52Q8N1B4 723 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 CACTIN-AS1Q8N1I8 211 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 SUSD6Q92537 303 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 CCDC51Q96ER9 411 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 C8orf76Q96K31 380 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 ZSCAN31Q96LW9 406 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 FAM193BQ96PV7 902 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 FOXP1Q9H334 677 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 NRDE2Q9H7Z3 1164 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 XPNPEP1Q9NQW7 623 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 SH2B1Q9NRF2 756 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-203ENST00000581497 BDP1A6H8Y1 2624 aa8.68□□□□□ -1.02
SRSF1-203ENST00000581497 C2orf71A6NGG8 1288 aa8.67□□□□□ -1.02
SRSF1-203ENST00000581497 INO80B-WBP1J3KQ70 363 aa8.67□□□□□ -1.02
SRSF1-203ENST00000581497 ALDH2P05091 517 aa8.67□□□□□ -1.02
SRSF1-203ENST00000581497 CTSAP10619 480 aa8.67□□□□□ -1.02
SRSF1-203ENST00000581497 ITGA4P13612 1032 aa8.67□□□□□ -1.02
SRSF1-203ENST00000581497 SPINK2P20155 84 aa8.67□□□□□ -1.02
SRSF1-203ENST00000581497 ARL2P36404 184 aa8.67□□□□□ -1.02
SRSF1-203ENST00000581497 GRIK1P39086 918 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms