RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 KLF10Q13118 480 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 DLGAP5Q15398 846 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 SUPT20HL1Q3ZLR7 823 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 OTUD7BQ6GQQ9 843 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 GRAMD4Q6IC98 578 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 RNF207Q6ZRF8 634 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 C15orf52Q6ZUT6 534 aaKnown RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 UBE3BQ7Z3V4 1068 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 GPR135Q8IZ08 494 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 BCL6BQ8N143 479 aaPredicted RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 ZNF808Q8N4W9 903 aaPredicted RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 LINS1Q8NG48 757 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 DNAAF4Q8WXU2 420 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 EDAQ92838 391 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 FOXRED1Q96CU9 486 aaPredicted RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 ERO1AQ96HE7 468 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 MPHOSPH8Q99549 860 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 OR10A2Q9H208 303 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 CD209Q9NNX6 404 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 SMC4Q9NTJ3 1288 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 ASB1Q9Y576 335 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 TRIM17Q9Y577 477 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 SLC30A1Q9Y6M5 507 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 DVL2O14641 736 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 IPO8O15397 1037 aaKnown RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 CSF1RP07333 972 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 KLRK1P26718 216 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 MSX2P35548 267 aaPredicted RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 STAT3P40763 770 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 KCNJ4P48050 445 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 FKBP1AP62942 108 aaKnown RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 FOXE3Q13461 319 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 GCKRQ14397 625 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 ZKSCAN2Q63HK3 967 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 POLNQ7Z5Q5 900 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 RTN4RL1Q86UN2 441 aaPredicted RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 TMEM176AQ96HP8 235 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 MRIQ9BWK5 157 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 API5Q9BZZ5 524 aaKnown RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 AGO3Q9H9G7 860 aaKnown RBP5.89□□□□□ -1.47
KARSP3-201ENST00000571212 KANSL2Q9H9L4 492 aa5.89□□□□□ -1.47
KARSP3-201ENST00000571212 OTOFQ9HC10 1997 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 SSC5DA1L4H1 1573 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 ANKRD18BA2A2Z9 1011 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 M0R2C6 588 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 IGSF3O75054 1194 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 HIP1RO75146 1068 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 APPP05067 770 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 HMGA2P52926 109 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 HGFACQ04756 655 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 CHRNDQ07001 517 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 ADAM15Q13444 863 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 CFAP100Q494V2 611 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 MAMDC4Q6UXC1 1216 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 CERS5Q8N5B7 392 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 CD99L2Q8TCZ2 262 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 CLMNQ96JQ2 1002 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 USP44Q9H0E7 712 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 OSBPL2Q9H1P3 480 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 FZD1Q9UP38 647 aa5.88□□□□□ -1.47
KARSP3-201ENST00000571212 CEP290O15078 2479 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 CCDC163A0A0D9SF12 145 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 GLRX3O76003 335 aaKnown RBP5.87□□□□□ -1.47
KARSP3-201ENST00000571212 IL1R1P14778 569 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 MECP2P51608 486 aaKnown RBP5.87□□□□□ -1.47
KARSP3-201ENST00000571212 RRP1P56182 461 aaKnown RBP5.87□□□□□ -1.47
KARSP3-201ENST00000571212 ALDH6A1Q02252 535 aaKnown RBP5.87□□□□□ -1.47
KARSP3-201ENST00000571212 SP3Q02447 781 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 CRHR2Q13324 411 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 BMS1Q14692 1282 aaKnown RBP5.87□□□□□ -1.47
KARSP3-201ENST00000571212 ARHGEF6Q15052 776 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 RABL6Q3YEC7 729 aaPredicted RBP5.87□□□□□ -1.47
KARSP3-201ENST00000571212 ZNF804AQ7Z570 1209 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 ANKRD13AQ8IZ07 590 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 ZNF503Q96F45 646 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 KAZALD1Q96I82 304 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 PRMT6Q96LA8 375 aaPredicted RBP5.87□□□□□ -1.47
KARSP3-201ENST00000571212 PCED1AQ9H1Q7 454 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 PLA2G3Q9NZ20 509 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 TNNQ9UQP3 1299 aa5.87□□□□□ -1.47
KARSP3-201ENST00000571212 ARAP2Q8WZ64 1704 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 CLRN2A0PK11 232 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 CYR61O00622 381 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 C1SP09871 688 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 EN2P19622 333 aaPredicted RBP5.86□□□□□ -1.47
KARSP3-201ENST00000571212 APEX1P27695 318 aaKnown RBP5.86□□□□□ -1.47
KARSP3-201ENST00000571212 RGS3P49796 1198 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 IFIT5Q13325 482 aaKnown RBP5.86□□□□□ -1.47
KARSP3-201ENST00000571212 SQSTM1Q13501 440 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 MTX1Q13505 466 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 TNFAIP1Q13829 316 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 ZNF460Q14592 562 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 GRM7Q14831 915 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 CCDC144BQ3MJ40 725 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 TMEM57Q8N5G2 664 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 IL17DQ8TAD2 202 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 BOCQ9BWV1 1114 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 ZSWIM4Q9H7M6 989 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 VEZTQ9HBM0 779 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 SAMD15Q9P1V8 674 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms