RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 F5P12259 2224 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 SPAG17Q6Q759 2223 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 SMIM28A0A1B0GU29 152 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 FRMD3A2A2Y4 597 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 H0YCG3 227 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 C2CD2LO14523 706 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 SYN3O14994 580 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 SLC16A4O15374 487 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 RFPL2O75678 378 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 SSBP05455 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
SPG11-224ENST00000561268 PTMAP06454 111 aaKnown RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 HNRNPA1P09651 372 aaKnown RBP eCLIP7.51□□□□□ -1.21
SPG11-224ENST00000561268 WEE2P0C1S8 567 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 IGFBP6P24592 240 aaPredicted RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 LRPAP1P30533 357 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 RAB33AQ14088 237 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 MRPL58Q14197 206 aaKnown RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 ZBTB6Q15916 424 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 PSMD5Q16401 504 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 GLRA4Q5JXX5 417 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 ATAT1Q5SQI0 421 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 CWF19L1Q69YN2 538 aaKnown RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 SLC8B1Q6J4K2 584 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 ELMSAN1Q6PJG2 1045 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 PRSS55Q6UWB4 352 aaPredicted RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 TMC5Q6UXY8 1006 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 OTOP3Q7RTS5 596 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 KREMEN2Q8NCW0 462 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 PRSS33Q8NF86 280 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 RIN2Q8WYP3 895 aaPredicted RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 LARP4BQ92615 738 aaKnown RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 RAD54LQ92698 747 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 HVCN1Q96D96 273 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 MFSD14AQ96MC6 490 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 TSPAN18Q96SJ8 248 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 CCDC94Q9BW85 323 aaPredicted RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 STRA6Q9BX79 667 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 PRKD2Q9BZL6 878 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 NUP62CLQ9H1M0 184 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 GOLGA2P5Q9HBQ8 144 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 POLD4Q9HCU8 107 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
SPG11-224ENST00000561268 SLC38A7Q9NVC3 462 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 GDAQ9Y2T3 454 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 STYXL1Q9Y6J8 313 aa7.51□□□□□ -1.21
SPG11-224ENST00000561268 ARHGEF37A1IGU5 675 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 CCDC169A6NNP5 214 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 ANHXE9PGG2 379 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 TK2O00142 265 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 ADAM12O43184 909 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 HRO43593 1189 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 GADD45BO75293 160 aaPredicted RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 ADCY5O95622 1261 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 CYP3A5P20815 502 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 TKTP29401 623 aaKnown RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 RPL9P32969 192 aaKnown RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 ABCD1P33897 745 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 CLCNKBP51801 687 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 SMTNP53814 917 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 GTF2BQ00403 316 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 POU5F1Q01860 360 aaKnown RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 NHLH1Q02575 133 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 KARSQ15046 597 aaKnown RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 FAM171A1Q5VUB5 890 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 DCLRE1AQ6PJP8 1040 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 RSPO2Q6UXX9 243 aaPredicted RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 ANKS3Q6ZW76 656 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 USP49Q70CQ1 688 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 HAUS6Q7Z4H7 955 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 GPBP1Q86WP2 473 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 BEST2Q8NFU1 509 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 HASPINQ8TF76 798 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 SMG7Q92540 1137 aaKnown RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 RABGGTAQ92696 567 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 NXPE3Q969Y0 559 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 DNAJC19Q96DA6 116 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 FAM122AQ96E09 287 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 CALML4Q96GE6 196 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 CDK5RAP3Q96JB5 506 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 ZBTB45Q96K62 511 aaPredicted RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 SUSD3Q96L08 255 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 MYADMQ96S97 322 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 PRRX2Q99811 253 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 CLSTN2Q9H4D0 955 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 PLEKHA5Q9HAU0 1116 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 PARVGQ9HBI0 331 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 OLFML3Q9NRN5 406 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 IGSF9Q9P2J2 1179 aa7.5□□□□□ -1.21
SPG11-224ENST00000561268 SRPRBQ9Y5M8 271 aaKnown RBP7.5□□□□□ -1.21
SPG11-224ENST00000561268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
SPG11-224ENST00000561268 A0A087X0B3 334 aa7.49□□□□□ -1.21
SPG11-224ENST00000561268 A0A0B4J269 797 aa7.49□□□□□ -1.21
SPG11-224ENST00000561268 NPHP3-ACAD11A0A0J9YXS1 232 aa7.49□□□□□ -1.21
SPG11-224ENST00000561268 CCDC195A0A1B0GUA6 201 aa7.49□□□□□ -1.21
SPG11-224ENST00000561268 WDR27A2RRH5 827 aa7.49□□□□□ -1.21
SPG11-224ENST00000561268 VPS37CA5D8V6 355 aaPredicted RBP7.49□□□□□ -1.21
SPG11-224ENST00000561268 SFI1A8K8P3 1242 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms