RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
XRCC1-202ENST00000543982 SEPT8Q92599 483 aa17.16■□□□□ 0.34
XRCC1-202ENST00000543982 NT5C1BQ96P26 610 aa17.16■□□□□ 0.34
XRCC1-202ENST00000543982 STK33Q9BYT3 514 aa17.16■□□□□ 0.34
XRCC1-202ENST00000543982 F8VZ95 297 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 B4GALT3O60512 393 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 HNRNPH3P31942 346 aaKnown RBP17.15■□□□□ 0.34
XRCC1-202ENST00000543982 NOP14P78316 857 aaKnown RBP17.15■□□□□ 0.34
XRCC1-202ENST00000543982 MEA1Q16626 185 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 CLLU1OSQ5K130 101 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.15■□□□□ 0.34
XRCC1-202ENST00000543982 ARHGAP20Q9P2F6 1191 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 GIT1Q9Y2X7 761 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 DERAQ9Y315 318 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 POMCP01189 267 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 RAB27AP51159 221 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 TRPC3Q13507 836 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 ZNF397Q8NF99 534 aaPredicted RBP17.15■□□□□ 0.34
XRCC1-202ENST00000543982 PAAF1Q9BRP4 392 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 SDCBP2Q9H190 292 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 RSAD1Q9HA92 442 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 INPP5FQ9Y2H2 1132 aa17.15■□□□□ 0.34
XRCC1-202ENST00000543982 ANO9A1A5B4 782 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 SPTLC1O15269 473 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 GFPT2O94808 682 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 ACRP10323 421 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 ACO1P21399 889 aaKnown RBP17.14■□□□□ 0.33
XRCC1-202ENST00000543982 C9orf57Q5W0N0 161 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 CCAR2Q8N163 923 aaKnown RBP17.14■□□□□ 0.33
XRCC1-202ENST00000543982 OLIG1Q8TAK6 271 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 AIPL1Q9NZN9 384 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 TRIP11Q15643 1979 aa17.14■□□□□ 0.33
XRCC1-202ENST00000543982 RAP1GAPP47736 663 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 CDH8P55286 799 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 SGSM1Q2NKQ1 1148 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 WDR44Q5JSH3 913 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 SFMBT2Q5VUG0 894 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 SCARA5Q6ZMJ2 495 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 C16orf59Q7L2K0 433 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
XRCC1-202ENST00000543982 SPAG5Q96R06 1193 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 FTHL17Q9BXU8 183 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 NXF1Q9UBU9 619 aaKnown RBP17.13■□□□□ 0.33
XRCC1-202ENST00000543982 ITGA11Q9UKX5 1188 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 UBQLN1Q9UMX0 589 aaKnown RBP17.13■□□□□ 0.33
XRCC1-202ENST00000543982 PIRO00625 290 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 ZC3H11AO75152 810 aaKnown RBP eCLIP17.13■□□□□ 0.33
XRCC1-202ENST00000543982 WEE2P0C1S8 567 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 SOX5P35711 763 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 ASPAP45381 313 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 RBP5P82980 135 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 CUL2Q13617 745 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 TSR1Q2NL82 804 aaKnown RBP17.13■□□□□ 0.33
XRCC1-202ENST00000543982 ZNF699Q32M78 642 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 NT5DC4Q86YG4 428 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 TMTC1Q8IUR5 882 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 BEST2Q8NFU1 509 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 SHC3Q92529 594 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 HPDLQ96IR7 371 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 HCSTQ9UBK5 93 aa17.13■□□□□ 0.33
XRCC1-202ENST00000543982 A0A0U1RQJ8 604 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 F8W810 466 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 RAG1P15918 1043 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 CAPN2P17655 700 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 WDR72Q3MJ13 1102 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 CYP26C1Q6V0L0 522 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 TOGARAM2Q6ZUX3 1019 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 ZNF280BQ86YH2 543 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 UBR7Q8N806 425 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 ATRIPQ8WXE1 791 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 SMYD3Q9H7B4 428 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 C1orf112Q9NSG2 853 aa17.12■□□□□ 0.33
XRCC1-202ENST00000543982 FAM170AA1A519 330 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 CYP26A1O43174 497 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 EVI5O60447 810 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 EOMESO95936 686 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 THP07101 528 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 EIF4A3P38919 411 aaKnown RBP17.11■□□□□ 0.33
XRCC1-202ENST00000543982 MFAP3P55082 362 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 GCNT1Q02742 428 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 ZNF571Q7Z3V5 609 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-202ENST00000543982 FAM71AQ8IYT1 594 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 C3orf58Q8NDZ4 430 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 SYN2Q92777 582 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-202ENST00000543982 PGBD4Q96DM1 585 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 TRMT1Q9NXH9 659 aaKnown RBP17.11■□□□□ 0.33
XRCC1-202ENST00000543982 CITO14578 2027 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 CASTOR2A6NHX0 329 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 CCP110O43303 1012 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 DDHD2O94830 711 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 SKIP12755 728 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 USP8P40818 1118 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 STAT1P42224 750 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 EPHB4P54760 987 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 ASIC2Q16515 512 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 CD300LGQ6UXG3 332 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 DNAAF5Q86Y56 855 aa17.11■□□□□ 0.33
XRCC1-202ENST00000543982 HACE1Q8IYU2 909 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms