RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 CAND2O75155 1236 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 PMS2P54278 862 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 ZNF699Q32M78 642 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 SLFN12LQ6IEE8 588 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 MRPL4Q9BYD3 311 aaKnown RBP16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 MYO1CO00159 1063 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 CTNNA2P26232 953 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 HSPA9P38646 679 aaKnown RBP16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 PSMD6Q15008 389 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 KCNT1Q5JUK3 1230 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 EPS8L3Q8TE67 593 aaKnown RBP16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 HERPUD2Q9BSE4 406 aa16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATP2C1-224ENST00000533801 ADCY3O60266 1144 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 C4BPAP04003 597 aaKnown RBP16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 TAS2R40P59535 323 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 METTL7BQ6UX53 244 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 TEX2Q8IWB9 1127 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 DNERQ8NFT8 737 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 PLVAPQ9BX97 442 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 PCSK1NQ9UHG2 260 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 ZNF646O15015 1829 aaPredicted RBP16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 NFASCO94856 1347 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 COILP38432 576 aaPredicted RBP16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 GPAT2Q6NUI2 795 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 ZNF365Q70YC5 407 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 DDX1Q92499 740 aaKnown RBP16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 DDX23Q9BUQ8 820 aaKnown RBP16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 RNPEPQ9H4A4 650 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 COL11A1P12107 1806 aaPredicted RBP16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 LRRD1A4D1F6 860 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 GOLGA8MH3BSY2 632 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 PPFIA4O75335 1185 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 CLTAP09496 248 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 C11orf63Q6NUN7 778 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 RIOX2Q8IUF8 465 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 HVCN1Q96D96 273 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 SAE1Q9UBE0 346 aaPredicted RBP16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 TJP2Q9UDY2 1190 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 ADAMTS5Q9UNA0 930 aa16.95■□□□□ 0.3
ATP2C1-224ENST00000533801 EIF3HO15372 352 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 LONRF1Q17RB8 773 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 EMC1Q8N766 993 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 NLRP7Q8WX94 980 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 ZNF606Q8WXB4 792 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 MINDY3Q9H8M7 445 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 PASKQ96RG2 1323 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 GRAP2O75791 330 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 KRT1P04264 644 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 CHRNA3P32297 505 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 MICALL1Q8N3F8 863 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 ANKRD42Q8N9B4 389 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 FBXL18Q96ME1 805 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 SENP7Q9BQF6 1050 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 PDLIM7Q9NR12 457 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 UVRAGQ9P2Y5 699 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 ZNF148Q9UQR1 794 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 MROH7Q68CQ1 1323 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 A0A0B4J269 797 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 RGS16O15492 202 aaPredicted RBP16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 LSP1P33241 339 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 PEX5P50542 639 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 GHRHRQ02643 423 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 GCNT1Q02742 428 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 GRM1Q13255 1194 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 LRRC14Q15048 493 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 DNAJC24Q6P3W2 148 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 ANKRD13AQ8IZ07 590 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 SLC10A4Q96EP9 437 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 SH3GL2Q99962 352 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 KIAA1586Q9HCI6 787 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 KCNK9Q9NPC2 374 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 CISHQ9NSE2 258 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
ATP2C1-224ENST00000533801 F8VP50 259 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 KIAA0391O15091 583 aaKnown RBP16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 PIAS1O75925 651 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 CYP1A2P05177 515 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 ARL2P36404 184 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 MTMR3Q13615 1198 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 ATF7IP2Q5U623 682 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 RUFY4Q6ZNE9 571 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 ERO1BQ86YB8 467 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 DYDC1Q8WWB3 177 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 PAIP2Q9BPZ3 127 aaKnown RBP16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 COQ4Q9Y3A0 265 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 A0A087WZ62 844 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 TNFRSF8P28908 595 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 BPIFB4P59827 614 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 CDO1Q16878 200 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 DUOXA2Q1HG44 320 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 C9orf72Q96LT7 481 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 CGRRF1Q99675 332 aa16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 FDXACB1Q9BRP7 624 aaPredicted RBP16.93■□□□□ 0.3
ATP2C1-224ENST00000533801 AGTPBP1Q9UPW5 1226 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms