RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ZNF197O14709 1029 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 OGTO15294 1046 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 TRAK2O60296 914 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 MICAL2O94851 1124 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 PAX3P23760 479 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 ARPP19P56211 112 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 STARD6P59095 220 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 GPC5P78333 572 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 CUL4AQ13619 759 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 SF3A1Q15459 793 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 ZBTB6Q15916 424 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 CD302Q8IX05 232 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 RAD54LQ92698 747 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 DDX12PQ92771 950 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 KIF12Q96FN5 646 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 RPP25Q9BUL9 199 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 CCSER1Q9C0I3 900 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 CYP4F11Q9HBI6 524 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 TUBGCP4Q9UGJ1 667 aa21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 AFF4Q9UHB7 1163 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-220ENST00000505307 K7ENM7 598 aa21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 M0QZQ0 153 aa21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 TBCAO75347 108 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 PLCG1P19174 1290 aa21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 PRKCQQ04759 706 aa21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 DHX8Q14562 1220 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 ELMOD1Q8N336 334 aa21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 LARP4BQ92615 738 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 NKD2Q969F2 451 aaPredicted RBP21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 HAPLN2Q9GZV7 340 aa21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 RPF1Q9H9Y2 349 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-220ENST00000505307 ECI2O75521 394 aa21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 OAZ2O95190 189 aa21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 ADRB2P07550 413 aa21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 DDIT3P35638 169 aa21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 MCM6Q14566 821 aa21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 KARSQ15046 597 aaKnown RBP21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 LEMD2Q8NC56 503 aa21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 ST13P5Q8NFI4 369 aaPredicted RBP21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 INSL5Q9Y5Q6 135 aa21.72■■□□□ 1.07
UBE2D3-220ENST00000505307 A0A0B4J269 797 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 PRR23AA6NEV1 266 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 LACTBL1A8MY62 500 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 AARSP49588 968 aaKnown RBP eCLIP21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 GTF2BQ00403 316 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 YWHAHQ04917 246 aaPredicted RBP21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 CYP4A22Q5TCH4 519 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 IQCEQ6IPM2 695 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 FRMD5Q7Z6J6 570 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 KRI1Q8N9T8 703 aaKnown RBP21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 SEMA4AQ9H3S1 761 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 ST6GALNAC4Q9H4F1 302 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 MYO15AQ9UKN7 3530 aa21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 PTPRZ1P23471 2315 aaPredicted RBP21.71■■□□□ 1.07
UBE2D3-220ENST00000505307 VPS37CA5D8V6 355 aaPredicted RBP21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 FAM189A1O60320 539 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 SEC24AO95486 1093 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 CPB1P15086 417 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 TNFSF9P41273 254 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 ADCY1Q08828 1119 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 MLF2Q15773 248 aaPredicted RBP21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 ENOX2Q16206 610 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 SLC5A9Q2M3M2 681 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 SLC44A4Q53GD3 710 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 SLFN12LQ6IEE8 588 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 ASCL5Q7RTU5 278 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 USP37Q86T82 979 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 MAP4K3Q8IVH8 894 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 BEST2Q8NFU1 509 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 PJA1Q8NG27 643 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 LRRC15Q8TF66 581 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 ING5Q8WYH8 240 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 MCRS1Q96EZ8 462 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 ZNF512Q96ME7 567 aaPredicted RBP21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 KXD1Q9BQD3 176 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 CORO1BQ9BR76 489 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 MSTO1Q9BUK6 570 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 DDX23Q9BUQ8 820 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 OSBPL6Q9BZF3 934 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 ZHX3Q9H4I2 956 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 DLGAP2Q9P1A6 1054 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 STK17AQ9UEE5 414 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 CCDC39Q9UFE4 941 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 PDCD11Q14690 1871 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 NOTCH4Q99466 2003 aa21.7■■□□□ 1.06
UBE2D3-220ENST00000505307 KANSL1LA0AUZ9 987 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 OR6C75A6NL08 312 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 POU5F1Q01860 360 aaKnown RBP21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 GRIN1Q05586 938 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 SPAG1Q07617 926 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 PRSS36Q5K4E3 855 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 SPATA1Q5VX52 437 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 PDZD4Q76G19 769 aaPredicted RBP21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 ELSPBP1Q96BH3 223 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 CPSF3Q9UKF6 684 aaKnown RBP21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 DERAQ9Y315 318 aa21.69■■□□□ 1.06
UBE2D3-220ENST00000505307 RIF1Q5UIP0 2472 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-220ENST00000505307 DCNP07585 359 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-220ENST00000505307 TYMPP19971 482 aa21.68■■□□□ 1.06
UBE2D3-220ENST00000505307 PLD1Q13393 1074 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms