RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 RALAP11233 206 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 TNFSF9P41273 254 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 SARSP49591 514 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 KLK7P49862 253 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 IRX5P78411 483 aaPredicted RBP10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 FPGSQ05932 587 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 ARL13BQ3SXY8 428 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 HS1BP3Q53T59 392 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 ZNF280DQ6N043 979 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 CCDC62Q6P9F0 684 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 CCDC170Q8IYT3 715 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 ACRBPQ8NEB7 543 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 TRIM58Q8NG06 486 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 TAS1R2Q8TE23 839 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 ZNF512Q96ME7 567 aaPredicted RBP10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 ZNF558Q96NG5 402 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 NXF3Q9H4D5 531 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 KIF9Q9HAQ2 790 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 INTS13Q9NVM9 706 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 HAUS2Q9NVX0 235 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 CNOT8Q9UFF9 292 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 MYH8P13535 1937 aa10.08□□□□□ -0.8
GAPVD1-219ENST00000495955 YWHAHQ04917 246 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 STILQ15468 1287 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 SEPT7Q16181 437 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 SPOPLQ6IQ16 392 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 PDZD4Q76G19 769 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 PCDHA13Q9Y5I0 950 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 A0A1B0GUL6 1792 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 A0A1B0GTH6 734 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 NEFHP12036 1026 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 GOLGA7BQ2TAP0 167 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 PDXDC1Q6P996 788 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 UBA3Q8TBC4 463 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 DHX38Q92620 1227 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 KCNK3O14649 394 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 GFPT1Q06210 699 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 MAPRE1Q15691 268 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 C10orf76Q5T2E6 689 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 CFAP58Q5T655 872 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 SLC24A5Q71RS6 500 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 ACOT1Q86TX2 421 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 LRRC37AA6NMS7 1700 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 FAM237AA0A1B0GTK4 181 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 KLRC2P26717 231 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 ATICP31939 592 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 ITKQ08881 620 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 NME3Q13232 169 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 FAM102AQ5T9C2 384 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 DBF4BQ8NFT6 615 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 ELMO3Q96BJ8 720 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 IGFLR1Q9H665 355 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 SEPT10Q9P0V9 454 aa10.07□□□□□ -0.8
GAPVD1-219ENST00000495955 NDUFA10O95299 355 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 GBP2P32456 591 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 PSMD6Q15008 389 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 NT5DC1Q5TFE4 455 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 OVOS1Q6IE37 1185 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 RIN2Q8WYP3 895 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 AGPAT1Q99943 283 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 MCOLN1Q9GZU1 580 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 KLRC4O43908 158 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 GAS8O95995 478 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 MCM3P25205 808 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 LHX1P48742 406 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 TRIM72Q6ZMU5 477 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 RFX6Q8HWS3 928 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 YAF2Q8IY57 180 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 CEP112Q8N8E3 955 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 ZWILCHQ9H900 591 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 GIT1Q9Y2X7 761 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 MORC2Q9Y6X9 1032 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 LRRIQ3A6PVS8 624 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 TSPAN1O60635 241 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 FTLP02792 175 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 FAM200BP0CF97 657 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 ARL4AP40617 200 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 LONRF2Q1L5Z9 754 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 KLHDC7AQ5VTJ3 777 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 PLCB1Q9NQ66 1216 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 DDX43Q9NXZ2 648 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 GJD2Q9UKL4 321 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 SSC5DA1L4H1 1573 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 UMODL1Q5DID0 1318 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 ADCY6O43306 1168 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 MOCS2O96007 188 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 NFICP08651 508 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 MBTD1Q05BQ5 628 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 SPIRE1Q08AE8 756 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 RWDD4Q6NW29 188 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 CC2D1AQ6P1N0 951 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 ZNF365Q70YC5 407 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 NT5DC4Q86YG4 428 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 KCTD6Q8NC69 237 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 CPA5Q8WXQ8 436 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 EMILIN2Q9BXX0 1053 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 TMEM117Q9H0C3 514 aa10.06□□□□□ -0.8
GAPVD1-219ENST00000495955 CPSF3Q9UKF6 684 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms