RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 KCNJ2P63252 427 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 ADCY2Q08462 1091 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 TMEM161BQ8NDZ6 487 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 ECT2Q9H8V3 914 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 PXMP2Q9NR77 195 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 GTF3C4Q9UKN8 822 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 AKT3Q9Y243 479 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 IVNS1ABPQ9Y6Y0 642 aa14.27□□□□□ -0.13
GPC1-209ENST00000495100 PFASO15067 1338 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 SSTR1P30872 391 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 MARSP56192 900 aaKnown RBP14.26□□□□□ -0.13
GPC1-209ENST00000495100 COBLL1Q53SF7 1204 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 DUPD1Q68J44 220 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 CYB5D1Q6P9G0 228 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 MOXD1Q6UVY6 613 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 PARP9Q8IXQ6 854 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 KCTD6Q8NC69 237 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 AGR3Q8TD06 166 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 HEXIM2Q96MH2 286 aaKnown RBP14.26□□□□□ -0.13
GPC1-209ENST00000495100 TMEM8AQ9HCN3 771 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 PARP2Q9UGN5 583 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 MYH1P12882 1939 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 GGPS1O95749 300 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 TARSP26639 723 aaKnown RBP14.26□□□□□ -0.13
GPC1-209ENST00000495100 KRT76Q01546 638 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 SLMAPQ14BN4 828 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 SETDB1Q15047 1291 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 TXNRD3NBQ6F5E7 133 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 OR6B2Q6IFH4 312 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 ACAD10Q6JQN1 1059 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 MFSD7Q6UXD7 560 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 CYP4X1Q8N118 509 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 COPS5Q92905 334 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 GPR88Q9GZN0 384 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 CYP26B1Q9NR63 512 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 FAM49BQ9NUQ9 324 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 CHMP2BQ9UQN3 213 aa14.26□□□□□ -0.13
GPC1-209ENST00000495100 TIAM2Q8IVF5 1701 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 SUN1O94901 812 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 SKOR1P84550 965 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 CYP24A1Q07973 514 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 DHX34Q14147 1143 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 HIPK4Q8NE63 616 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 SHCBP1LQ9BZQ2 653 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 NEU2Q9Y3R4 380 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 GOLGA4Q13439 2230 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 DDX60Q8IY21 1712 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
GPC1-209ENST00000495100 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 DSG3P32926 999 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 PSMC1P62191 440 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 SLC15A2Q16348 729 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 GLRA4Q5JXX5 417 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 SNF8Q96H20 258 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 CEP41Q9BYV8 373 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 RANBP17Q9H2T7 1088 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 SLC24A3Q9HC58 644 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 NPHS2Q9NP85 383 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 GGA3Q9NZ52 723 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 NR2E3Q9Y5X4 410 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 COL14A1Q05707 1796 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 EIF3BP55884 814 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 GAD2Q05329 585 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 TNFAIP1Q13829 316 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 MIS18BP1Q6P0N0 1132 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 EXOC3L1Q86VI1 746 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 LRRC8CQ8TDW0 803 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 PYROXD1Q8WU10 500 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
GPC1-209ENST00000495100 FIZ1Q96SL8 496 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 POLIQ9UNA4 740 aa14.25□□□□□ -0.13
GPC1-209ENST00000495100 FAM187AA6NFU0 413 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 AUHQ13825 339 aaKnown RBP14.24□□□□□ -0.13
GPC1-209ENST00000495100 ZNF699Q32M78 642 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 KCNV1Q6PIU1 500 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 CCDC91Q7Z6B0 441 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 FAM71DQ8N9W8 422 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 ERP27Q96DN0 273 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 SMC6Q96SB8 1091 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 NAALADL1Q9UQQ1 740 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 NUB1Q9Y5A7 615 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 CST8O60676 142 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 SHOX2O60902 331 aaPredicted RBP14.24□□□□□ -0.13
GPC1-209ENST00000495100 YARSP54577 528 aaKnown RBP14.24□□□□□ -0.13
GPC1-209ENST00000495100 EFTUD2Q15029 972 aaKnown RBP eCLIP14.24□□□□□ -0.13
GPC1-209ENST00000495100 TDRD10Q5VZ19 366 aaKnown RBP14.24□□□□□ -0.13
GPC1-209ENST00000495100 ZDHHC24Q6UX98 284 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 TRPM8Q7Z2W7 1104 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 ASAP3Q8TDY4 903 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 PPP1R36Q96LQ0 422 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 CCT8L1PA6NM43 557 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 VWA5AO00534 786 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 PDHA1P08559 390 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 PHKA2P46019 1235 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 NT5C2P49902 561 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 JAK3P52333 1124 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 DARS2Q6PI48 645 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms