RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 TMEM189-UBE2V1I3L0A0 370 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 URODP06132 367 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 EPCAMP16422 314 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 TKTP29401 623 aaKnown RBP12.64□□□□□ -0.39
UBA3-211ENST00000493957 LRPAP1P30533 357 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 UBE2HP62256 183 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 DSG1Q02413 1049 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 FAM171A1Q5VUB5 890 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 KANK3Q6NY19 840 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 CLEC17AQ6ZS10 378 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 CEP57Q86XR8 500 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
UBA3-211ENST00000493957 KLHL5Q96PQ7 755 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 UBQLN1Q9UMX0 589 aaKnown RBP12.64□□□□□ -0.39
UBA3-211ENST00000493957 SPTLC1O15269 473 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 TEX28O15482 410 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 ADAM12O43184 909 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 KINO60870 393 aaKnown RBP12.63□□□□□ -0.39
UBA3-211ENST00000493957 NDUFV1P49821 464 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 USP41Q3LFD5 358 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 HS2ST1Q7LGA3 356 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 CD302Q8IX05 232 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 SPATA20Q8TB22 786 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 PLEKHO2Q8TD55 490 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 SLC22A17Q8WUG5 538 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
UBA3-211ENST00000493957 FBXL18Q96ME1 805 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 GZF1Q9H116 711 aaPredicted RBP12.63□□□□□ -0.39
UBA3-211ENST00000493957 ASB7Q9H672 318 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 MRPL17Q9NRX2 175 aaKnown RBP12.63□□□□□ -0.39
UBA3-211ENST00000493957 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 CDH22Q9UJ99 828 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 MAN1B1Q9UKM7 699 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 HCFC2Q9Y5Z7 792 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 IRAK3Q9Y616 596 aa12.63□□□□□ -0.39
UBA3-211ENST00000493957 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 DOCK8Q8NF50 2099 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 IL18RAPO95256 599 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 LDHAP00338 332 aaKnown RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 CYP3A5P20815 502 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 BMP6P22004 513 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 FGFR3P22607 806 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 RPL9P32969 192 aaKnown RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 MCM4P33991 863 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 PRCPP42785 496 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 CASP4P49662 377 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 TFAMQ00059 246 aaKnown RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 SNRNP35Q16560 246 aaKnown RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 KIAA1841Q6NSI8 718 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 RSPO2Q6UXX9 243 aaPredicted RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 C12orf56Q8IXR9 622 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 BEST2Q8NFU1 509 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 SMARCE1Q969G3 411 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 PPP2R3CQ969Q6 453 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 CCDC47Q96A33 483 aaKnown RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
UBA3-211ENST00000493957 TTPALQ9BTX7 342 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 APOL5Q9BWW9 433 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 DMAC2Q9NW81 257 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 DPP3Q9NY33 737 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 COG5Q9UP83 839 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 LHX6Q9UPM6 363 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 DERAQ9Y315 318 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 A0A0C4DFX4 3053 aa12.62□□□□□ -0.39
UBA3-211ENST00000493957 MYO10Q9HD67 2058 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 TTC28Q96AY4 2481 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 ANO9A1A5B4 782 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 GRXCR2A6NFK2 248 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 ZNF233A6NK53 670 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 BIN1O00499 593 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 PIRO00625 290 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 PDXKO00764 312 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 NR3C1P04150 777 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 SPATA31D3P0C874 917 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 KLRC2P26717 231 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 CLCN4P51793 760 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 POU5F1Q01860 360 aaKnown RBP12.61□□□□□ -0.39
UBA3-211ENST00000493957 CYP24A1Q07973 514 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 PSMD5Q16401 504 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 CAMK4Q16566 473 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 LEXMQ3ZCV2 418 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 ZCWPW2Q504Y3 356 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
UBA3-211ENST00000493957 SYCE2Q6PIF2 218 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 SPATA31D4Q6ZUB0 917 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 GUF1Q8N442 669 aaKnown RBP12.61□□□□□ -0.39
UBA3-211ENST00000493957 C12orf76Q8N812 135 aaPredicted RBP12.61□□□□□ -0.39
UBA3-211ENST00000493957 C1orf127Q8N9H9 656 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 XXYLT1Q8NBI6 393 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms