RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 EPHA5P54756 1037 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 TWF1Q12792 350 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 ELAVL2Q12926 359 aaKnown RBP16.85■□□□□ 0.29
U2AF1-211ENST00000486519 CYP4A22Q5TCH4 519 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 SLC8B1Q6J4K2 584 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 SLC27A1Q6PCB7 646 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 TCEAL8Q8IYN2 117 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 SYNPOQ8N3V7 929 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 ETNPPLQ8TBG4 499 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 FAM200AQ8TCP9 573 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 LRRC3Q9BY71 257 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 SLITRK6Q9H5Y7 841 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 ACACAQ13085 2346 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 A0A1W2PRU2 124 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 OTOL1A6NHN0 477 aaPredicted RBP16.84■□□□□ 0.29
U2AF1-211ENST00000486519 EIF4E1BA6NMX2 242 aaKnown RBP16.84■□□□□ 0.29
U2AF1-211ENST00000486519 SGSM2O43147 1006 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 RNF40O75150 1001 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 RECQL4O94761 1208 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 RHOBTB1O94844 696 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 IGHDP01880 384 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 THP07101 528 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 ATF2P15336 505 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 GBP1P32455 592 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 ELF1P32519 619 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 GLRA4Q5JXX5 417 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
U2AF1-211ENST00000486519 PMS2CLQ68D20 193 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 C1orf228Q6PIY5 440 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 RAB44Q7Z6P3 723 aaPredicted RBP16.84■□□□□ 0.29
U2AF1-211ENST00000486519 IFNLR1Q8IU57 520 aaPredicted RBP16.84■□□□□ 0.29
U2AF1-211ENST00000486519 ARID3BQ8IVW6 561 aaPredicted RBP16.84■□□□□ 0.29
U2AF1-211ENST00000486519 HACE1Q8IYU2 909 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 C6orf50Q9HD87 102 aa16.84■□□□□ 0.29
U2AF1-211ENST00000486519 A0A1B0GUA9 196 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 CCDC194A0A1B0GVG4 234 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 B3GAT3O94766 335 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 U2AF2P26368 475 aaKnown RBP eCLIP16.83■□□□□ 0.28
U2AF1-211ENST00000486519 TMEM196Q5HYL7 178 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 ANKS3Q6ZW76 656 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 TMC8Q8IU68 726 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 LURAP1LQ8IV03 231 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 TMEM209Q96SK2 561 aa16.83■□□□□ 0.28
U2AF1-211ENST00000486519 ANTXRLA6NF34 631 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 GOLGA8AA7E2F4 631 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 TMEM189-UBE2V1I3L0A0 370 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 SLC27A2O14975 620 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 PRAMEF12O95522 483 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 PLA2G2AP14555 144 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 ADD1P35611 737 aaKnown RBP16.82■□□□□ 0.28
U2AF1-211ENST00000486519 RFC5P40937 340 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 QARSP47897 775 aaKnown RBP16.82■□□□□ 0.28
U2AF1-211ENST00000486519 SEMA3BQ13214 749 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 Q4G0T1 1027 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 TCP11Q8WWU5 503 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 EZH1Q92800 747 aaPredicted RBP16.82■□□□□ 0.28
U2AF1-211ENST00000486519 MTRQ99707 1265 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 TPSD1Q9BZJ3 242 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 VAV3Q9UKW4 847 aa16.82■□□□□ 0.28
U2AF1-211ENST00000486519 ASAP2O43150 1006 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 ZBTB43O43298 467 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 VNN2O95498 520 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 EDN1P05305 212 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 GLRA2P23416 452 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
U2AF1-211ENST00000486519 CYP2U1Q7Z449 544 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 NOSTRINQ8IVI9 506 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 CAMKK1Q8N5S9 505 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 TBCKQ8TEA7 893 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 PIGKQ92643 395 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 ZNF512Q96ME7 567 aaPredicted RBP16.81■□□□□ 0.28
U2AF1-211ENST00000486519 POLR3CQ9BUI4 534 aaPredicted RBP16.81■□□□□ 0.28
U2AF1-211ENST00000486519 SMG9Q9H0W8 520 aaKnown RBP16.81■□□□□ 0.28
U2AF1-211ENST00000486519 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 RGL1Q9NZL6 768 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 MBD1Q9UIS9 605 aaPredicted RBP16.81■□□□□ 0.28
U2AF1-211ENST00000486519 GON4LQ3T8J9 2241 aa16.81■□□□□ 0.28
U2AF1-211ENST00000486519 KALRNO60229 2985 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 PCDH15Q96QU1 1955 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 SLC37A4O43826 429 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 USP11P51784 963 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 C19orf57Q0VDD7 668 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 PCBP1Q15365 356 aaKnown RBP eCLIP16.8■□□□□ 0.28
U2AF1-211ENST00000486519 UPP1Q16831 310 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 XKR9Q5GH70 373 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 DAGLBQ8NCG7 672 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 CRISPLD1Q9H336 500 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 SLC32A1Q9H598 525 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 PDZD7Q9H5P4 517 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 CCDC86Q9H6F5 360 aaKnown RBP16.8■□□□□ 0.28
U2AF1-211ENST00000486519 HPS4Q9NQG7 708 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 TMEM74BQ9NUR3 256 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 FBXL5Q9UKA1 691 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 CEP192Q8TEP8 1941 aa16.8■□□□□ 0.28
U2AF1-211ENST00000486519 ENGP17813 658 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 YWHABP31946 246 aaKnown RBP16.79■□□□□ 0.28
U2AF1-211ENST00000486519 NCBP1Q09161 790 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms