RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 MRPL47Q9HD33 250 aaKnown RBP15.19■□□□□ 0.02
NR1H3-220ENST00000481020 NKX1-2Q9UD57 310 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-220ENST00000481020 POLLQ9UGP5 575 aa15.19■□□□□ 0.02
NR1H3-220ENST00000481020 DRG1Q9Y295 367 aaKnown RBP15.19■□□□□ 0.02
NR1H3-220ENST00000481020 ZHX2Q9Y6X8 837 aa15.19■□□□□ 0.02
NR1H3-220ENST00000481020 SMAPO00193 183 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 NVLO15381 856 aaKnown RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 TGDSO95455 350 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 CETPP11597 493 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 UNGP13051 313 aaPredicted RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 PTDSS1P48651 473 aaKnown RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 PAPOLAP51003 745 aaKnown RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 SF3A3Q12874 501 aaKnown RBP eCLIP15.18■□□□□ 0.026e-9■■■■■ 32.1
NR1H3-220ENST00000481020 TMED2Q15363 201 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 GSTA3Q16772 222 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 TRAPPC3LQ5T215 181 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 RBM26Q5T8P6 1007 aaKnown RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 LIN9Q5TKA1 542 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 ZNF772Q68DY9 489 aaPredicted RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 CCDC125Q86Z20 511 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 SP8Q8IXZ3 490 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 ARHGAP24Q8N264 748 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 GALNT15Q8N3T1 639 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 FBXL13Q8NEE6 735 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 GPR101Q96P66 508 aaPredicted RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 LXNQ9BS40 222 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 IDI2Q9BXS1 227 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 FAM192AQ9GZU8 254 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 BCAS3Q9H6U6 928 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 MLXIPLQ9NP71 852 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 ANKFY1Q9P2R3 1169 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 PSMC3IPQ9P2W1 217 aaPredicted RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 ZFP69BQ9UJL9 534 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 HAO1Q9UJM8 370 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 SHOC2Q9UQ13 582 aa15.18■□□□□ 0.02
NR1H3-220ENST00000481020 RBBP6Q7Z6E9 1792 aaKnown RBP15.18■□□□□ 0.02
NR1H3-220ENST00000481020 A8MXQ7 604 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 DNALI1O14645 258 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ALOX15BO15296 676 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 TYROBPO43914 113 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 NDUFB10O96000 172 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 VIL1P09327 827 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 RRM1P23921 792 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ABCD1P33897 745 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 PTPN7P35236 360 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 SH3BGRP55822 239 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 MXRA7P84157 204 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 MCL1Q07820 350 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 SNX1Q13596 522 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 TNIP1Q15025 636 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 MUM1Q2TAK8 710 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 EAPPQ56P03 285 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 HHATQ5VTY9 493 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 APOBEC3HQ6NTF7 200 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 C4orf50Q6ZRC1 276 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 EP400NLQ6ZTU2 488 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 FAM47EQ6ZV65 393 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 PCGF5Q86SE9 256 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 CCDC24Q8N4L8 307 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 CYP2W1Q8TAV3 490 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 FAM136AQ96C01 138 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ZNF333Q96JL9 665 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ZDHHC15Q96MV8 337 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ZNF577Q9BSK1 485 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 VPS11Q9H270 941 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 IKZF4Q9H2S9 585 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 KIAA1586Q9HCI6 787 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 PAPOLBQ9NRJ5 636 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 PCDHB2Q9Y5E7 798 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 SCINQ9Y6U3 715 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 BTAF1O14981 1849 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 COL2A1P02458 1487 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 DPPA5A6NC42 116 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ATMINO43313 823 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 P4HBP07237 508 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ADSSP30520 456 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 PHBP35232 272 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 KRT72Q14CN4 511 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 USH1GQ495M9 461 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 LRRC38Q5VT99 294 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 CWF19L1Q69YN2 538 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 SIAH1Q8IUQ4 282 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 KSR1Q8IVT5 923 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 RDH13Q8NBN7 331 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 RBM41Q96IZ5 413 aaKnown RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 FRMD8P1Q9BZ68 369 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-220ENST00000481020 OSBPL8Q9BZF1 889 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 UNC45AQ9H3U1 944 aa15.17■□□□□ 0.02
NR1H3-220ENST00000481020 ARHGEF10LQ9HCE6 1279 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms