RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 OLFML3Q9NRN5 406 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 SERTAD1Q9UHV2 236 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 KCNH3Q9ULD8 1083 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 UBQLN1Q9UMX0 589 aaKnown RBP8.99□□□□□ -0.97
HDAC6-221ENST00000477561 EXOC7Q9UPT5 735 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 NR2E1Q9Y466 385 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 TIMM13Q9Y5L4 95 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-221ENST00000477561 STYXL1Q9Y6J8 313 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 PLXNA3P51805 1871 aa8.99□□□□□ -0.97
HDAC6-221ENST00000477561 ADRB2P07550 413 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 CUL4BQ13620 913 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 RAB33AQ14088 237 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 TMEM132DQ14C87 1099 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 POSTNQ15063 836 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 VARS2Q5ST30 1063 aaKnown RBP8.98□□□□□ -0.97
HDAC6-221ENST00000477561 SPATA1Q5VX52 437 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 PDXDC1Q6P996 788 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 ELMSAN1Q6PJG2 1045 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 CRELD2Q6UXH1 353 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-221ENST00000477561 ANKS3Q6ZW76 656 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 BEST2Q8NFU1 509 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 HDAC7Q8WUI4 952 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 SMG7Q92540 1137 aaKnown RBP8.98□□□□□ -0.97
HDAC6-221ENST00000477561 ZNF707Q96C28 371 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-221ENST00000477561 SUSD3Q96L08 255 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 C7orf25Q9BPX7 421 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 CBWD1Q9BRT8 395 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 FAM213AQ9BRX8 229 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 MTRRQ9UBK8 725 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 LIMD1Q9UGP4 676 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 DPP7Q9UHL4 492 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 FBXW11Q9UKB1 542 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 POLIQ9UNA4 740 aa8.98□□□□□ -0.97
HDAC6-221ENST00000477561 CITO14578 2027 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 SYN3O14994 580 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 CCL16O15467 120 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 XPOTO43592 962 aaKnown RBP8.97□□□□□ -0.97
HDAC6-221ENST00000477561 GPR37L1O60883 481 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 GADD45BO75293 160 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-221ENST00000477561 ZMYND10O75800 440 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 ASGR2P07307 311 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 C8AP07357 584 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 PFKFB1P16118 471 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 CYP3A5P20815 502 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 COL9A1P20849 921 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 LRPAP1P30533 357 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 HOXD13P35453 343 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 WNT7BP56706 349 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 NTHL1P78549 312 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 ROR1Q01973 937 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 ALCAMQ13740 583 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 CTXN3Q4LDR2 81 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 FAM26FQ5R3K3 315 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 PPM1LQ5SGD2 360 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 LIN9Q5TKA1 542 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 DSTYKQ6XUX3 929 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 CCDC149Q6ZUS6 474 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 GRASPQ7Z6J2 395 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-221ENST00000477561 CD302Q8IX05 232 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 NELFCDQ8IXH7 590 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 CEP57L1Q8IYX8 460 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 TDRD5Q8NAT2 981 aaKnown RBP8.97□□□□□ -0.97
HDAC6-221ENST00000477561 ST13P5Q8NFI4 369 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-221ENST00000477561 CMASQ8NFW8 434 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-221ENST00000477561 SLC7A14Q8TBB6 771 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 GPT2Q8TD30 523 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 FAM84AQ96KN4 292 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 SMOC2Q9H3U7 446 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 TMEM206Q9H813 350 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 BACE2Q9Y5Z0 518 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 VWA8A3KMH1 1905 aa8.97□□□□□ -0.97
HDAC6-221ENST00000477561 A0A1W2PQ27 194 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 A0A1W2PQ64 194 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 A0A1W2PQD8 194 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 WDR27A2RRH5 827 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 H7C4K7 107 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 CLIC2O15247 247 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 SPTLC1O15269 473 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 ACTN4O43707 911 aaKnown RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 TBC1D4O60343 1298 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 N4BP1O75113 896 aaKnown RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 LETM1O95202 739 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 C1RP00736 705 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 SLFN14P0C7P3 912 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 GARTP22102 1010 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 CMA1P23946 247 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 GBP2P32456 591 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 CDR1P51861 262 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 ZXDAP98168 799 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 TFAMQ00059 246 aaKnown RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 MRPL58Q14197 206 aaKnown RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 C9orf57Q5W0N0 161 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 SCARA3Q6AZY7 606 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 ARMCX5Q6P1M9 558 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 STXBP4Q6ZWJ1 553 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 UNC13DQ70J99 1090 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 OTOP3Q7RTS5 596 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 EFCAB13Q8IY85 973 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms