RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 GOSR1O95249 250 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 EOMESO95936 686 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CHGBP05060 677 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ITGA5P08648 1049 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CLTBP09497 229 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CSH1P0DML2 217 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CSH2P0DML3 217 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TNNT1P13805 278 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 PDE6AP16499 860 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 LAG3P18627 525 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SP100P23497 879 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 NNMTP40261 264 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SSR1P43307 286 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 AFMP43652 599 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 MCM2P49736 904 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SEPHS1P49903 392 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CCR9P51686 369 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 AFF3P51826 1226 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 MAP2K6P52564 334 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 LIMK1P53667 647 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 EMP3P54852 163 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 HSD17B7P56937 341 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 RBP5P82980 135 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ID3Q02535 119 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ADCY2Q08462 1091 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CYP4F3Q08477 520 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 LRRC74AQ0VAA2 488 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 EPS8Q12929 822 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SLC12A1Q13621 1099 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 COG2Q14746 738 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 EPHA7Q15375 998 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 UBE3CQ15386 1083 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SEC23AQ15436 765 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TSTQ16762 297 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 KRTCAP3Q53RY4 240 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 HSP90B2PQ58FF3 399 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CT83Q5H943 113 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF362Q5T0B9 420 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ATPAF1Q5TC12 328 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ANGEL2Q5VTE6 544 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ARL6IP4Q66PJ3 421 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ALKBH5Q6P6C2 394 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 BORAQ6PGQ7 559 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 KLHL17Q6TDP4 642 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 KLHL24Q6TFL4 600 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 IL27RAQ6UWB1 636 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 FAM180AQ6UWF9 173 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 UNC5DQ6UXZ4 953 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 KIAA1211Q6ZU35 1233 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 MIGA2Q7L4E1 593 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SLC9B2Q86UD5 537 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 FAM35AQ86V20 835 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TSPYL5Q86VY4 417 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 OSTM1Q86WC4 334 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CXorf67Q86X51 503 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TRMT2AQ8IZ69 625 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 LINC00528Q8N1L1 170 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 USHBP1Q8N6Y0 703 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SPC24Q8NBT2 197 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC150Q8NCX0 1101 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 RNF214Q8ND24 703 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 C3orf20Q8ND61 904 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 LILRB1Q8NHL6 650 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 GDAP1Q8TB36 358 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 STT3BQ8TCJ2 826 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 PIGOQ8TEQ8 1089 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 THAP4Q8WY91 577 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 RIN2Q8WYP3 895 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TBC1D5Q92609 795 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CUL5Q93034 780 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CEP95Q96GE4 821 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 PIGSQ96S52 555 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 SLC30A3Q99726 388 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 FSD1Q9BTV5 496 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 HGH1Q9BTY7 390 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 METTL22Q9BUU2 404 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ACE2Q9BYF1 805 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ANO3Q9BYT9 981 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 AGXT2Q9BYV1 514 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TRIM6Q9C030 488 aaPredicted RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TRIM5Q9C035 493 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 UBE2OQ9C0C9 1292 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ZMAT4Q9H898 229 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ERVMER34-1Q9H9K5 563 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 NOD2Q9HC29 1040 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ERVK-5Q9HDB9 667 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 RAD18Q9NS91 495 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ADPRHL2Q9NX46 363 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 DNAJB12Q9NXW2 375 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 FRRS1LQ9P0K9 344 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ADD3Q9UEY8 706 aaKnown RBP3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CBLCQ9ULV8 474 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TBX20Q9UMR3 447 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 MAN2B2Q9Y2E5 1009 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 DTNAQ9Y4J8 743 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 PAXBP1Q9Y5B6 917 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 NUMBLQ9Y6R0 609 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 KIF14Q15058 1648 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms