RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 BATF3Q9NR55 127 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 RAB20Q9NX57 234 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 MYPNQ86TC9 1320 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 PI4K2BG5E9Z4 385 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 DHX15O43143 795 aaKnown RBP12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 T-ENOLP0DO92 83 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 TCF4P15884 667 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 RPA3P35244 121 aaPredicted RBP12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 GPC3P51654 580 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 CCDC15Q0P6D6 951 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 SLC1A5Q15758 541 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 SLC39A4Q6P5W5 647 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 FAM13CQ8NE31 585 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 FBXL13Q8NEE6 735 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 WDR81Q562E7 1941 aa12.46□□□□□ -0.42
PDZRN3-203ENST00000462146 P4HBP07237 508 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 KRT10P13645 584 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 GNAZP19086 355 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 KLRC2P26717 231 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 SKIV2L2P42285 1042 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 PCNX4Q63HM2 1172 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 KAZNQ674X7 775 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 CDCA2Q69YH5 1023 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 CAPRIN2Q6IMN6 1127 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 SYDE1Q6ZW31 735 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 SV2AQ7L0J3 742 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 GSTA5Q7RTV2 222 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 SLC7A6OSQ96CW6 309 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 C11orf70Q9BRQ4 267 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 LRMDAQ9H2I8 198 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 TXLNGQ9NUQ3 528 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 A0A1W2PPM1 405 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 EME2A4GXA9 379 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 YWHABP31946 246 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 CAV1Q03135 178 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 STAT4Q14765 748 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 DENND1AQ8TEH3 1009 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 NAF1Q96HR8 494 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 AGBL1Q96MI9 1066 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 LBHD1Q9BQE6 289 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 C12orf65Q9H3J6 166 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 TRABDQ9H4I3 376 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 USP20Q9Y2K6 914 aa12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 ASTN2O75129 1339 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-203ENST00000462146 CNGA1P29973 690 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 RAD23BP54727 409 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 NCKAP1LP55160 1127 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 BLMHQ13867 455 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 DACT2Q5SW24 774 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 SPOPLQ6IQ16 392 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 LONP2Q86WA8 852 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 KIFAP3Q92845 792 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 LRRC37BQ96QE4 947 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 RAB3IPQ96QF0 476 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 GLIS2Q9BZE0 524 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 OSBPL8Q9BZF1 889 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 TBX20Q9UMR3 447 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 COQ4Q9Y3A0 265 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 STARD13Q9Y3M8 1113 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 LINGO3P0C6S8 592 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 MAPTP10636 758 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 DSG3P32926 999 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 MAN1A1P33908 653 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 YARSP54577 528 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 C10orf82Q8WW14 230 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 BSNDQ8WZ55 320 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 GRAMD1AQ96CP6 724 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 HAUS1Q96CS2 278 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 RIT2Q99578 217 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 TBC1D10AQ9BXI6 508 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 RNPEPL1Q9HAU8 725 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 DNPEPQ9ULA0 475 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 DOCK5Q9H7D0 1870 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 NFIBO00712 420 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 PMM2O15305 246 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 ENTPD5O75356 428 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 WFS1O76024 890 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 TPBGLP0DKB5 382 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 MYBL1P10243 752 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 KRT15P19012 456 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 PSMC4P43686 418 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 TUBP50607 506 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 WNT7BP56706 349 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 CENPCQ03188 943 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 GRIK3Q13003 919 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 MTM1Q13496 603 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 ALCAMQ13740 583 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 EFTUD2Q15029 972 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 SETDB1Q15047 1291 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms