RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 N4BP1O75113 896 aaKnown RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 POU2F2P09086 479 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 P4HA1P13674 534 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 FAM171A1Q5VUB5 890 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 C9orf57Q5W0N0 161 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 DPH6Q7L8W6 267 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 ZMAT2Q96NC0 199 aaKnown RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 M0QZQ0 153 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 TFAMQ00059 246 aaKnown RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 PSMD5Q16401 504 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 SKOR2Q2VWA4 1001 aaPredicted RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 KIAA0319Q5VV43 1072 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 ZC3H3Q8IXZ2 948 aaKnown RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 PLEKHA4Q9H4M7 779 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 NT5C1B-RDH14C9J2C7 533 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 PIRO00625 290 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 NFICP08651 508 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 CA8P35219 290 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 CLCNKBP51801 687 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 MCCD1P59942 119 aaPredicted RBP11.55□□□□□ -0.56
UBR4-208ENST00000459947 PAK1Q13153 545 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 ZCWPW2Q504Y3 356 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 FAM114A1Q8IWE2 563 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 FAM186BQ8IYM0 893 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 THEM5Q8N1Q8 247 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 TTC39CQ8N584 583 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 MTRRQ9UBK8 725 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 ANK1P16157 1881 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 GOLGA8IPA6NC78 632 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 GOLGA8JA6NMD2 632 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 CLIC2O15247 247 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 TNNI1P19237 187 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 ADAM9Q13443 819 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 ADAM15Q13444 863 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 TRPC3Q13507 836 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 TPGS2Q68CL5 300 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 RIN2Q8WYP3 895 aaPredicted RBP11.55□□□□□ -0.56
UBR4-208ENST00000459947 KLHL5Q96PQ7 755 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 UBE2ZQ9H832 354 aaPredicted RBP11.55□□□□□ -0.56
UBR4-208ENST00000459947 PRCPP42785 496 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 ERVFC1P60507 584 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 LEXMQ3ZCV2 418 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 SEZ6Q53EL9 994 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 ZBTB41Q5SVQ8 909 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 CCDC183Q5T5S1 534 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 CBWD2Q8IUF1 395 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 GLIS3Q8NEA6 775 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 CMASQ8NFW8 434 aaPredicted RBP11.55□□□□□ -0.56
UBR4-208ENST00000459947 IMPG2Q9BZV3 1241 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
UBR4-208ENST00000459947 TISP43B9A030 160 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 PHACTR2O75167 634 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 GLUD1P00367 558 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CYP11A1P05108 521 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 KLRC2P26717 231 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 AFF1P51825 1210 aaKnown RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 HYAL1Q12794 435 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CEP135Q66GS9 1140 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CCDC149Q6ZUS6 474 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 FILIP1Q7Z7B0 1213 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 NECTIN4Q96NY8 510 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 B4GALT3O60512 393 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 LILRB3O75022 631 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CLASP2O75122 1294 aaKnown RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 NRIP1P48552 1158 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CLDN10P78369 228 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 MRPS5P82675 430 aaKnown RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 SOX4Q06945 474 aaPredicted RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 PLD1Q13393 1074 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CAMK1Q14012 370 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 TOP6BLQ8N6T0 577 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 C2orf15Q8WU43 125 aaKnown RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 BCL7CQ8WUZ0 217 aaPredicted RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 C18orf25Q96B23 403 aaPredicted RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 ERCC5P28715 1186 aaPredicted RBP11.54□□□□□ -0.56
UBR4-208ENST00000459947 NLRP12P59046 1061 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 ITIH3Q06033 890 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CTC1Q2NKJ3 1217 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 SFXN1Q9H9B4 322 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 PDE11AQ9HCR9 933 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 GDAP2Q9NXN4 497 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 HSFX1Q9UBD0 423 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 RWDD2AQ9UIY3 292 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 CD207Q9UJ71 328 aa11.54□□□□□ -0.56
UBR4-208ENST00000459947 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.53□□□□□ -0.56
UBR4-208ENST00000459947 PBX3P40426 434 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 MTHFRP42898 656 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 VAMP7P51809 220 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 CETN1Q12798 172 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 SMAD4Q13485 552 aaKnown RBP11.53□□□□□ -0.56
UBR4-208ENST00000459947 RAB33AQ14088 237 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 SPRED2Q7Z698 418 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 FRMD5Q7Z6J6 570 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 EFCAB13Q8IY85 973 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 PARD3BQ8TEW8 1205 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 NELFBQ8WX92 580 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 TRIP11Q15643 1979 aa11.53□□□□□ -0.56
UBR4-208ENST00000459947 HUS1O60921 280 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms