RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 MAGEF1Q9HAY2 307 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 DERAQ9Y315 318 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 CLUHO75153 1309 aa16.64■□□□□ 0.25
NUP50-204ENST00000417702 TMEM221A6NGB7 291 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 M0R296 226 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
NUP50-204ENST00000417702 XYLBO75191 536 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 GBP2P32456 591 aaPredicted RBP16.63■□□□□ 0.25
NUP50-204ENST00000417702 ASIC1P78348 528 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 SIGLEC14Q08ET2 396 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 KCNA1Q09470 495 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 MTMR3Q13615 1198 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 TMEM132DQ14C87 1099 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 CTXN3Q4LDR2 81 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 SPATA1Q5VX52 437 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 SLC8B1Q6J4K2 584 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 RSPO2Q6UXX9 243 aaPredicted RBP16.63■□□□□ 0.25
NUP50-204ENST00000417702 RTL10Q7L3V2 364 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 SLC7A14Q8TBB6 771 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 PYM1Q9BRP8 204 aaKnown RBP16.63■□□□□ 0.25
NUP50-204ENST00000417702 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 SORCS3Q9UPU3 1222 aa16.63■□□□□ 0.25
NUP50-204ENST00000417702 ADSSP30520 456 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 HOXA9P31269 272 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 ELF1P32519 619 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 GUCY2FP51841 1108 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 CASP5P51878 434 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 ARPP19P56211 112 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 RESP18Q5W5W9 173 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 ZNF280DQ6N043 979 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 DSTYKQ6XUX3 929 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 UBALD2Q8IYN6 164 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 ZNF461Q8TAF7 563 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 MFSD14AQ96MC6 490 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 IKZF4Q9H2S9 585 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 FBXL5Q9UKA1 691 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 POLIQ9UNA4 740 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 C2CD2Q9Y426 696 aa16.62■□□□□ 0.25
NUP50-204ENST00000417702 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
NUP50-204ENST00000417702 C2orf16Q68DN1 1984 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 M0QZQ0 153 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
NUP50-204ENST00000417702 CCL16O15467 120 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 PRPF6O94906 941 aaKnown RBP16.61■□□□□ 0.25
NUP50-204ENST00000417702 IL18RAPO95256 599 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 LDHAP00338 332 aaKnown RBP16.61■□□□□ 0.25
NUP50-204ENST00000417702 ASGR2P07307 311 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 NFICP08651 508 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 GARTP22102 1010 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 PAX3P23760 479 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 KRT85P78386 507 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 ROR1Q01973 937 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 MRPL58Q14197 206 aaKnown RBP16.61■□□□□ 0.25
NUP50-204ENST00000417702 CNNM4Q6P4Q7 775 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 USP37Q86T82 979 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 PBXIP1Q96AQ6 731 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 C7orf25Q9BPX7 421 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 FAM213AQ9BRX8 229 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.254e-8■■■■■ 51.6
NUP50-204ENST00000417702 RAPGEFL1Q9UHV5 662 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 KCNH3Q9ULD8 1083 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 ATP6V1DQ9Y5K8 247 aa16.61■□□□□ 0.25
NUP50-204ENST00000417702 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 ARHGEF37A1IGU5 675 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 PRRG1O14668 218 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 TBC1D4O60343 1298 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 FSHRP23945 695 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
NUP50-204ENST00000417702 YWHAHQ04917 246 aaPredicted RBP16.6■□□□□ 0.25
NUP50-204ENST00000417702 GET4Q7L5D6 327 aaPredicted RBP16.6■□□□□ 0.25
NUP50-204ENST00000417702 BMP8AQ7Z5Y6 402 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 GRASPQ7Z6J2 395 aaPredicted RBP16.6■□□□□ 0.25
NUP50-204ENST00000417702 CEP57L1Q8IYX8 460 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 TMEM130Q8N3G9 435 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 SPATA32Q96LK8 384 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 OXCT2Q9BYC2 517 aaPredicted RBP16.6■□□□□ 0.25
NUP50-204ENST00000417702 FGFBP2Q9BYJ0 223 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 IGSF9Q9P2J2 1179 aa16.6■□□□□ 0.25
NUP50-204ENST00000417702 WDR27A2RRH5 827 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 ABLIM3O94929 683 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 OAZ2O95190 189 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 POU2F2P09086 479 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 ATF2P15336 505 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 LILRA4P59901 499 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 C9orf57Q5W0N0 161 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 ARMCX5Q6P1M9 558 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 CRELD2Q6UXH1 353 aaPredicted RBP16.59■□□□□ 0.25
NUP50-204ENST00000417702 NT5DC4Q86YG4 428 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
NUP50-204ENST00000417702 SAAL1Q96ER3 474 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 MYADMQ96S97 322 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 EPS15L1Q9UBC2 864 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms