RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FAM200BP0CF97 657 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 ZNF720Q7Z2F6 126 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 FBXO16Q8IX29 292 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 TMED2Q15363 201 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 CENPPQ6IPU0 288 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 TRIM59Q8IWR1 403 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 KIRREL3Q8IZU9 778 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 HPS3Q969F9 1004 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 RUSC1Q9BVN2 902 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 DPP3Q9NY33 737 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 PGK2P07205 417 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 GALCP54803 685 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 P3H1Q32P28 736 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 LMBRD2Q68DH5 695 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 SH2D3AQ9BRG2 576 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 ALDH1A3P47895 512 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 TOB1P50616 345 aaPredicted RBP17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 NOGQ13253 232 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 BOLA3Q53S33 107 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 WDR49Q8IV35 697 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 FRMD8Q9BZ67 464 aaPredicted RBP17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 SAYSD1Q9NPB0 183 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 BAG5Q9UL15 447 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 PRRG1O14668 218 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 VDRP11473 427 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 LCP1P13796 627 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 OR1G1P47890 313 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 TTC23LQ6PF05 361 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 SPATA4Q8NEY3 305 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 CATSPERBQ9H7T0 1116 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 ANKRD65E5RJM6 399 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 NCK2O43639 380 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 NME3Q13232 169 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 PHLDB3Q6NSJ2 640 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 MYCBPQ99417 103 aaPredicted RBP17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 NUF2Q9BZD4 464 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 RSAD1Q9HA92 442 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 F9P00740 461 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 CCDC15Q0P6D6 951 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 SPOPLQ6IQ16 392 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 SNF8Q96H20 258 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 HEMGNQ9BXL5 484 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 FAM129AQ9BZQ8 928 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 ASB7Q9H672 318 aa17.7■□□□□ 0.42
PCDHA13-202ENST00000409494 KPNA7A9QM74 516 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 SLCO1A2P46721 670 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 SULT1E1P49888 294 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 RPL10AP62906 217 aaKnown RBP17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 CUL2Q13617 745 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 VGLL4Q14135 290 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 NFE2Q16621 373 aaPredicted RBP17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 ARHGAP15Q53QZ3 475 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 SPON2Q9BUD6 331 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 FRMD8P1Q9BZ68 369 aaPredicted RBP17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 DYRK4Q9NR20 520 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 SNX12Q9UMY4 172 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 VIPAS39Q9H9C1 493 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 PARP4Q9UKK3 1724 aaKnown RBP17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 REPS2Q8NFH8 660 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 SNX24Q9Y343 169 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 KRT14P02533 472 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 GYPCP04921 128 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 ADORA2AP29274 412 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 LHX1P48742 406 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 REXO1L1PQ8IX06 675 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 MTMR14Q8NCE2 650 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 HMX1Q9NP08 348 aaPredicted RBP17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 FHOD1Q9Y613 1164 aa17.69■□□□□ 0.42
PCDHA13-202ENST00000409494 LLGL1Q15334 1064 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 TRIP13Q15645 432 aaPredicted RBP17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 CFAP36Q96G28 342 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 PIK3C2AO00443 1686 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 ST8SIA6P61647 398 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 TATDN1Q6P1N9 297 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 PARD3BQ8TEW8 1205 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 ASIC4Q96FT7 647 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 RNPC3Q96LT9 517 aaKnown RBP17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 SMYD2Q9NRG4 433 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 NEMP1O14524 444 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 RARRES1P49788 294 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 DEUP1Q05D60 604 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 ST3GAL1Q11201 340 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 ZKSCAN8Q15776 578 aaPredicted RBP17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 CCDC137Q6PK04 289 aaKnown RBP17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 OTOP1Q7RTM1 612 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 SIK2Q9H0K1 926 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 WDR70Q9NW82 654 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 SENP1Q9P0U3 644 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 PLAGL2Q9UPG8 496 aa17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
PCDHA13-202ENST00000409494 ESYT3A0FGR9 886 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 FBXO21O94952 628 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 FGRP09769 529 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 GZMAP12544 262 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms