RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 GJB1P08034 283 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 VEGFAP15692 232 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 EEF1GP26641 437 aaKnown RBP6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 GZMKP49863 264 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 APBA1Q02410 837 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 ICA1Q05084 483 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 SLC13A2Q13183 592 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 BLMHQ13867 455 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 RNF151Q2KHN1 245 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 CCDC38Q502W7 563 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 MCTP2Q6DN12 878 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 CNKSR3Q6P9H4 555 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZNF783Q6ZMS7 281 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 PDZD4Q76G19 769 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 SYTL1Q8IYJ3 562 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 CMTM4Q8IZR5 234 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 PCSK9Q8NBP7 692 aaKnown RBP6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 OR5M3Q8NGP4 307 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 OR56A3Q8NH54 315 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 CCT6BQ92526 530 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 STK33Q9BYT3 514 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 PNMA2Q9UL42 364 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 hCG_1642624A0A1W2PR95 340 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 KIAA0391O15091 583 aaKnown RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 WDHD1O75717 1129 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 STC2O76061 302 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 MT-ND5P03915 603 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 CSTBP04080 98 aaKnown RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 KRT1P04264 644 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 CYP1A1P04798 512 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 THP07101 528 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 MTHFD1P11586 935 aaKnown RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 ATP5JP18859 108 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 KCNJ5P48544 419 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 ALDH9A1P49189 494 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 DUSP8Q13202 625 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 CTBP1Q13363 440 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 MRPL49Q13405 166 aaKnown RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 FAM214AQ32MH5 1076 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZMAT1Q5H9K5 638 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 ANKS6Q68DC2 871 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 GGT6Q6P531 493 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 UBE3BQ7Z3V4 1068 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZNF354CQ86Y25 554 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 CACNA2D3Q8IZS8 1091 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZNF527Q8NB42 609 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 SPATA5Q8NB90 893 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 KCNN1Q92952 543 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 IQCDQ96DY2 449 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 SNX22Q96L94 193 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 ISCA1Q9BUE6 129 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 PACSIN1Q9BY11 444 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 MYLK2Q9H1R3 596 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 AGO3Q9H9G7 860 aaKnown RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 BARX1Q9HBU1 254 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 IL23AQ9NPF7 189 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 NCDNQ9UBB6 729 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 GRHPRQ9UBQ7 328 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 LZTS1Q9Y250 596 aa6.04□□□□□ -1.44
HMGB1P10-201ENST00000395823 A0A087WWL8 130 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 FFAR2O15552 330 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 ANXA2P07355 339 aaKnown RBP6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 RARBP10826 455 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 GLDCP23378 1020 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 CAP1Q01518 475 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 CREMQ03060 361 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 BIRC3Q13489 604 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 CSRP2Q16527 193 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 FAM26FQ5R3K3 315 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZNF529Q6P280 563 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 PGBD2Q6P3X8 592 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 UNC13DQ70J99 1090 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZNF365Q70YC5 407 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 RALYLQ86SE5 291 aaKnown RBP6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 CARFQ8N187 725 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 ADAMTS17Q8TE56 1095 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 RABGGTAQ92696 567 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZNF566Q969W8 418 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 PPP1R16BQ96T49 567 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZNF518BQ9C0D4 1074 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 AS3MTQ9HBK9 375 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 GPR35Q9HC97 309 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 RLIMQ9NVW2 624 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 FBXO34Q9NWN3 711 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 JKAMPQ9P055 326 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 SLC39A10Q9ULF5 831 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 AGAP1Q9UPQ3 857 aa6.03□□□□□ -1.44
HMGB1P10-201ENST00000395823 A0A087WZ62 844 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 CLCA1A8K7I4 914 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 SLC26A4O43511 780 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 UNC5CO95185 931 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 SRGNP10124 158 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 MESP2Q0VG99 397 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 HABP2Q14520 560 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 CRB2Q5IJ48 1285 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 LVRNQ6Q4G3 990 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 TXLNBQ8N3L3 684 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 FANCBQ8NB91 859 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms