RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 SPDYCQ5MJ68 293 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 PPP1R2P3Q6NXS1 205 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 GTF3C2Q8WUA4 911 aaPredicted RBP9.66□□□□□ -0.86
TDP1-202ENST00000393452 C18orf8Q96DM3 657 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TCHPQ9BT92 498 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 NFKBIZQ9BYH8 718 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TXLNGYQ9BZA5 131 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 IMPG2Q9BZV3 1241 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TRIM7Q9C029 511 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 PDGFCQ9NRA1 345 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 ZDHHC18Q9NUE0 388 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 PLAAQ9Y263 795 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 ZSWIM8A7E2V4 1837 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TCRBV7S2A1N4TA0A589 114 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 PODXLO00592 558 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 FSCN2O14926 492 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 HOXC6P09630 235 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 HARSP12081 509 aaKnown RBP9.65□□□□□ -0.86
TDP1-202ENST00000393452 HNRNPH2P55795 449 aaKnown RBP9.65□□□□□ -0.86
TDP1-202ENST00000393452 SKOR1P84550 965 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 POU5F1BQ06416 359 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 MTMR3Q13615 1198 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 TFDP1Q14186 410 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 ZSCAN26Q16670 478 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 TMEM63BQ5T3F8 832 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 PLEKHA7Q6IQ23 1121 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 TTC27Q6P3X3 843 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 MPZL3Q6UWV2 235 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 ARMCX2Q7L311 632 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 ZBTB33Q86T24 672 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 RHPN2Q8IUC4 686 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 TRAPPC12Q8WVT3 735 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 SLCO2A1Q92959 643 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 MAGOHBQ96A72 148 aaKnown RBP9.65□□□□□ -0.86
TDP1-202ENST00000393452 PLVAPQ9BX97 442 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 MTMR12Q9C0I1 747 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 DPH5Q9H2P9 285 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 EFCC1Q9HA90 598 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 RASAL2Q9UJF2 1139 aa9.65□□□□□ -0.86
TDP1-202ENST00000393452 UNCXA6NJT0 531 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 MYO1FO00160 1098 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 ASAP2O43150 1006 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 B4GALT4O60513 344 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 PPFIA2O75334 1257 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 RARAP10276 462 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 C1QBPQ07021 282 aaKnown RBP9.65□□□□□ -0.87
TDP1-202ENST00000393452 ARHGAP1Q07960 439 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 MAMLD1Q13495 774 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 DUOXA2Q1HG44 320 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 EFCAB12Q6NXP0 572 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 CCDC137Q6PK04 289 aaKnown RBP9.65□□□□□ -0.87
TDP1-202ENST00000393452 LEKR1Q6ZMV7 388 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 HOMEZQ8IX15 550 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 ZNF606Q8WXB4 792 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 RUNDC3BQ96NL0 473 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 FMO2Q99518 471 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 LRRC19Q9H756 370 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 ERAP1Q9NZ08 941 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 GRHL1Q9NZI5 618 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 PNMA3Q9UL41 463 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 MTUS1Q9ULD2 1270 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 PLXNB2O15031 1838 aa9.65□□□□□ -0.87
TDP1-202ENST00000393452 PROSCO94903 275 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 C22orf31O95567 290 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 CYP2C8P10632 490 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 GBP1P32455 592 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 COILP38432 576 aaPredicted RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 FNTAP49354 379 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 MYL6P60660 151 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 MBTD1Q05BQ5 628 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 KCTD19Q17RG1 926 aaPredicted RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 SGSM1Q2NKQ1 1148 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 ZNF792Q3KQV3 632 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 LIN9Q5TKA1 542 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 ATF7IP2Q5U623 682 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 WDR78Q5VTH9 848 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 TAPT1Q6NXT6 567 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 ZDHHC24Q6UX98 284 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 LINC01465Q8N7H1 131 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 ATP6V1G3Q96LB4 118 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 XYLT2Q9H1B5 865 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 RNPEPQ9H4A4 650 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 ADAM22Q9P0K1 906 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 CALCOCO1Q9P1Z2 691 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 TNFSF13BQ9Y275 285 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 RBM47A0AV96 593 aaKnown RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 A6NNZ2 444 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 INO80B-WBP1J3KQ70 363 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 THAP12O43422 761 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 GJB1P08034 283 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 POTEJP0CG39 1038 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 MMP8P22894 467 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 CLCN3P51790 818 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 ZNF844Q08AG5 666 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 LAMC2Q13753 1193 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 FAM187BQ17R55 369 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms