RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 PARVAQ9NVD7 372 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 IP6K2Q9UHH9 426 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ARHGAP26Q9UNA1 814 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 AGRPO00253 132 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 IGF2BP3O00425 579 aaKnown RBP eCLIP5.26□□□□□ -1.57
LTN1-202ENST00000389194 DCTN3O75935 186 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 PGM1P36871 562 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TRIM65Q6PJ69 517 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 RAB44Q7Z6P3 723 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 SP8Q8IXZ3 490 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 SPDYE1Q8NFV5 336 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 HASPINQ8TF76 798 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 L3MBTL3Q96JM7 780 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 XPO6Q96QU8 1125 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 MMP19Q99542 508 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 AGPAT3Q9NRZ7 376 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 HOXC10Q9NYD6 342 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 WARS2Q9UGM6 360 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 ZC3H13Q5T200 1668 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 MEGF6O75095 1541 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 PTPRUQ92729 1446 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 DYNC1LI2O43237 492 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 LUC7L3O95232 432 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 CALB1P05937 261 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ETFBP38117 255 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 SF3B3Q15393 1217 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 ACCSLQ4AC99 568 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 RTKN2Q8IZC4 609 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 NETO2Q8NC67 525 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ATL2Q8NHH9 583 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 AKT1S1Q96B36 256 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TMEM121Q9BTD3 319 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 MTMR12Q9C0I1 747 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TSPYL2Q9H2G4 693 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 ZNF446Q9NWS9 450 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 UBP1Q9NZI7 540 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ZNF70Q9UC06 446 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 C1orf167Q5SNV9 1468 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 H3BRJ5 948 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TPST1O60507 370 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 PHF2O75151 1096 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ENDOD1O94919 500 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TRAPPC11Q7Z392 1133 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 SCFD1Q8WVM8 642 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 Q9H521 79 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ACAD9Q9H845 621 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 VCX3AQ9NNX9 186 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 IPO11Q9UI26 975 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 HAO1Q9UJM8 370 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 LZTS1Q9Y250 596 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 CEMIPQ8WUJ3 1361 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 RNF103-CHMP3A0A140T963 221 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 KRT38O76015 456 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 LDHAP00338 332 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 KRT4P19013 534 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 BYSLQ13895 437 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 SEC23AQ15436 765 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TRADDQ15628 312 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 DCAF6Q58WW2 860 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ARMCX2Q7L311 632 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ARMC2Q8NEN0 867 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TATDN2Q93075 761 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 SMAD5Q99717 465 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 ZFATQ9P243 1243 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 SAE1Q9UBE0 346 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 GRID2IPA4D2P6 1211 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 EPHB6O15197 1021 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 S100BP04271 92 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 H2AFXP16104 143 aaPredicted RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 PHKA2P46019 1235 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ARMC9Q7Z3E5 817 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 DEFB132Q7Z7B7 95 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 PABPC5Q96DU9 382 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 CPB2Q96IY4 423 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 ERP44Q9BS26 406 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 XPOTO43592 962 aaKnown RBP5.25□□□□□ -1.57
LTN1-202ENST00000389194 CYTH3O43739 400 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 E2F6O75461 281 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 SETSIPP0DME0 302 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 RRM1P23921 792 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 ATICP31939 592 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 HNRNPH1P31943 449 aaKnown RBP5.25□□□□□ -1.57
LTN1-202ENST00000389194 MAGEA4P43358 317 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 GLRBP48167 497 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 CLCN3P51790 818 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 MDM2Q00987 491 aaPredicted RBP5.25□□□□□ -1.57
LTN1-202ENST00000389194 R3HDM1Q15032 1099 aaKnown RBP5.25□□□□□ -1.57
LTN1-202ENST00000389194 TAF1BQ53T94 588 aaPredicted RBP5.25□□□□□ -1.57
LTN1-202ENST00000389194 TAS1R2Q8TE23 839 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 KAT5Q92993 513 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 SEMA4AQ9H3S1 761 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 GGA3Q9NZ52 723 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 ZC3H7BQ9UGR2 993 aaKnown RBP5.25□□□□□ -1.57
LTN1-202ENST00000389194 SUGT1Q9Y2Z0 365 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 ITIH6Q6UXX5 1313 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 ITGB3P05106 788 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 EMC2Q15006 297 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 ARL13BQ3SXY8 428 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 LRRC8EQ6NSJ5 796 aa5.25□□□□□ -1.57
LTN1-202ENST00000389194 FAM111AQ96PZ2 611 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms