RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GOLGA8OA6NCC3 632 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 GOLGA8NF8WBI6 632 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 WEE2P0C1S8 567 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 ADORA2BP29275 332 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 NPTX2P47972 431 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 CASP5P51878 434 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 ARL13BQ3SXY8 428 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 METTL23Q86XA0 190 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 TAS1R2Q8TE23 839 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 FAM161BQ96MY7 647 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 SERPINB12Q96P63 405 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 MMTAG2Q9BU76 263 aaKnown RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 PCDHGC5Q9Y5F6 944 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 EML1O00423 815 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 CREB3O43889 395 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 ZWINTO95229 277 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 SYF2O95926 243 aaKnown RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 RARGP13631 454 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 CAP2P40123 477 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 KCNMA1Q12791 1236 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 SMTNL2Q2TAL5 461 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 BEST2Q8NFU1 509 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 ACSF2Q96CM8 615 aaPredicted RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 DNAJC19Q96DA6 116 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 LRGUKQ96M69 825 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 FAM129AQ9BZQ8 928 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 APOL1O14791 398 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 KCNN4O15554 427 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 SLITRK3O94933 977 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 BRD2P25440 801 aaKnown RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 C1orf146Q5VVC0 180 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 C3orf20Q8ND61 904 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 BAP1Q92560 729 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 KLF6Q99612 283 aaPredicted RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 XPO7Q9UIA9 1087 aaKnown RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 MAFGO15525 162 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 PDGFRAP16234 1089 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 STX1BP61266 288 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 KCNA1Q09470 495 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 NFX1Q12986 1120 aaKnown RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 CUL2Q13617 745 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 GRAMD1BQ3KR37 738 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 NT5DC3Q86UY8 548 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 C1orf131Q8NDD1 294 aaKnown RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 GSDMBQ8TAX9 411 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 DHX38Q92620 1227 aaKnown RBP12.32□□□□□ -0.44
COPA-202ENST00000368069 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 WDR35Q9P2L0 1181 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 CHMP2BQ9UQN3 213 aa12.32□□□□□ -0.44
COPA-202ENST00000368069 XRN1Q8IZH2 1706 aaKnown RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 NFIBO00712 420 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 CES2O00748 559 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 CST8O60676 142 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 KPNA2P52292 529 aaKnown RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 ART3Q13508 389 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ZFPM1Q8IX07 1006 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 CEP120Q8N960 986 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 RDM1Q8NG50 284 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 C17orf75Q9HAS0 396 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 EPS15L1Q9UBC2 864 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 AGAP1Q9UPQ3 857 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ZBTB39O15060 712 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 HUS1O60921 280 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 RRM1P23921 792 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 RGS7P49802 495 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ZNF844Q08AG5 666 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 SEZ6Q53EL9 994 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 CYP4A22Q5TCH4 519 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 C11orf63Q6NUN7 778 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ZNF662Q6ZS27 426 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 SEPT1Q8WYJ6 367 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 NIF3L1Q9GZT8 377 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 CDC42EP4Q9H3Q1 356 aaKnown RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 RAB6BQ9NRW1 208 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 A8MXQ7 604 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ZBTB7AO95365 584 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 MX2P20592 715 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 POLE2P56282 527 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 TAF1BQ53T94 588 aaPredicted RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 APOBEC3HQ6NTF7 200 aaKnown RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 OTOP1Q7RTM1 612 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 TMC3Q7Z5M5 1100 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 RSPH3Q86UC2 560 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 TTC39CQ8N584 583 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 PPWD1Q96BP3 646 aaKnown RBP12.31□□□□□ -0.44
COPA-202ENST00000368069 GPRASP2Q96D09 838 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 MMP19Q99542 508 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 GAKO14976 1311 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 RFC5P40937 340 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 EPHB1P54762 984 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 ACTR2P61160 394 aa12.31□□□□□ -0.44
COPA-202ENST00000368069 AP1B1Q10567 949 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms