RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 ZNF668Q96K58 619 aaPredicted RBP18.81■□□□□ 0.6
SMG5-201ENST00000361813 CCDC138Q96M89 665 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 FAM111AQ96PZ2 611 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 AS3MTQ9HBK9 375 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 ZNF711Q9Y462 761 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 ACADSP16219 412 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 KCNJ2P63252 427 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 OCRLQ01968 901 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 GABPAQ06546 454 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 FAM102AQ5T9C2 384 aaPredicted RBP18.81■□□□□ 0.6
SMG5-201ENST00000361813 LDHDQ86WU2 507 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 INPP4AQ96PE3 977 aaPredicted RBP18.81■□□□□ 0.6
SMG5-201ENST00000361813 MED15Q96RN5 788 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 PYGMP11217 842 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 TMEM259Q4ZIN3 620 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 SHCBP1LQ9BZQ2 653 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 RPF1Q9H9Y2 349 aaKnown RBP18.81■□□□□ 0.6
SMG5-201ENST00000361813 ZC3H7BQ9UGR2 993 aaKnown RBP18.81■□□□□ 0.6
SMG5-201ENST00000361813 QPCTQ16769 361 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 KAT2BQ92831 832 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 SLC35C1Q96A29 364 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 PPP1R36Q96LQ0 422 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 PCMTD2Q9NV79 361 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 PRPSAP1Q14558 356 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 LRRC55Q6ZSA7 311 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 PRPF39Q86UA1 669 aaKnown RBP18.8■□□□□ 0.6
SMG5-201ENST00000361813 VGLL2Q8N8G2 317 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 POLR3FQ9H1D9 316 aaPredicted RBP18.8■□□□□ 0.6
SMG5-201ENST00000361813 PREX1Q8TCU6 1659 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 CST8O60676 142 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 SERPINB3P29508 390 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 SURF1Q15526 300 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 SMTNL2Q2TAL5 461 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 RARS2Q5T160 578 aaKnown RBP18.8■□□□□ 0.6
SMG5-201ENST00000361813 ACAD10Q6JQN1 1059 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 AADACL2Q6P093 401 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 ACAD11Q709F0 780 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 RBBP8NLQ8NC74 664 aaPredicted RBP18.8■□□□□ 0.6
SMG5-201ENST00000361813 PRPF31Q8WWY3 499 aaKnown RBP18.8■□□□□ 0.6
SMG5-201ENST00000361813 ARHGEF26Q96DR7 871 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 GGA2Q9UJY4 613 aa18.8■□□□□ 0.6
SMG5-201ENST00000361813 SLC26A4O43511 780 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 WEE2P0C1S8 567 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 GEMIN4P57678 1058 aaKnown RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 COG2Q14746 738 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 SLC5A5Q92911 643 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 JCADQ9P266 1359 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 SNX3O60493 162 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 DRD4P21917 467 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 ATXN3P54252 364 aaPredicted RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 PPP4CP60510 307 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 IL1RL1Q01638 556 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 EP400NLQ6ZTU2 488 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 EIF1ADQ8N9N8 165 aaKnown RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 HIC2Q96JB3 615 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 CBWD1Q9BRT8 395 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 AKT3Q9Y243 479 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 GPR75-ASB3A0A0A6YYF3 556 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 MAGEA13PA6NCF6 341 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 KPNA7A9QM74 516 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 SHOX2O60902 331 aaPredicted RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 HNRNPH3P31942 346 aaKnown RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 M0QYV0 167 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 RARAP10276 462 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 PAPOLAP51003 745 aaKnown RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 ITPK1Q13572 414 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 DAB2IPQ5VWQ8 1189 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 PLA2G4FQ68DD2 849 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 SLC30A10Q6XR72 485 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 ZNF277Q9NRM2 450 aaPredicted RBP18.79■□□□□ 0.6
SMG5-201ENST00000361813 FAM53CQ9NYF3 392 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 PRR12Q9ULL5 1215 aa18.79■□□□□ 0.6
SMG5-201ENST00000361813 KCNN4O15554 427 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 RBP3P10745 1247 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 ATXN2LQ8WWM7 1075 aaKnown RBP18.78■□□□□ 0.6
SMG5-201ENST00000361813 POLR3CQ9BUI4 534 aaPredicted RBP18.78■□□□□ 0.6
SMG5-201ENST00000361813 P4HA2O15460 535 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 ASNSP08243 561 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 KRT35Q92764 455 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 PPCSQ9HAB8 311 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 TMEM8AQ9HCN3 771 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 WTIPA6NIX2 430 aaPredicted RBP18.78■□□□□ 0.6
SMG5-201ENST00000361813 ADCY3O60266 1144 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 RRM1P23921 792 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 EPHB2P29323 1055 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 SDC4P31431 198 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 SESN2P58004 480 aaPredicted RBP18.78■□□□□ 0.6
SMG5-201ENST00000361813 KCND2Q9NZV8 630 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 KLHL8Q9P2G9 620 aaPredicted RBP18.78■□□□□ 0.6
SMG5-201ENST00000361813 RNF103-CHMP3A0A140T963 221 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 CBX6O95503 412 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 OSBPP22059 807 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 SFNP31947 248 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 BTKQ06187 659 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 SLC47A2Q86VL8 602 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 CBWD2Q8IUF1 395 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 KIFC3Q9BVG8 833 aa18.78■□□□□ 0.6
SMG5-201ENST00000361813 CTNNAL1Q9UBT7 734 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms