RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 RIPK3Q9Y572 518 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 TMEM120BA0PK00 339 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 VWA5AO00534 786 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 OAS1P00973 400 aaKnown RBP18.8■□□□□ 0.6
GYPC-202ENST00000356887 PSAPP07602 524 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 ACO1P21399 889 aaKnown RBP18.8■□□□□ 0.6
GYPC-202ENST00000356887 ADCY8P40145 1251 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 C2CD6Q53TS8 623 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 LMBRD2Q68DH5 695 aaPredicted RBP18.8■□□□□ 0.6
GYPC-202ENST00000356887 CCDC50Q8IVM0 306 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 IFT74Q96LB3 600 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 VPS33BQ9H267 617 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 GINM1Q9NU53 330 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 NINJ2Q9NZG7 142 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 TELO2Q9Y4R8 837 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 PSTPIP1O43586 416 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 SNX3O60493 162 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 FDX1P10109 184 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 RALAP11233 206 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 SF3A3Q12874 501 aaKnown RBP eCLIP18.79■□□□□ 0.6
GYPC-202ENST00000356887 SNCBQ16143 134 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 CCNG2Q16589 344 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 LIN9Q5TKA1 542 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 TDRD10Q5VZ19 366 aaKnown RBP18.79■□□□□ 0.6
GYPC-202ENST00000356887 TRPM8Q7Z2W7 1104 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 SCLT1Q96NL6 688 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 HEMGNQ9BXL5 484 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 POLR3FQ9H1D9 316 aaPredicted RBP18.79■□□□□ 0.6
GYPC-202ENST00000356887 CYP26B1Q9NR63 512 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 STYXL1Q9Y6J8 313 aa18.79■□□□□ 0.6
GYPC-202ENST00000356887 H0YCG3 227 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 O00370 1275 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 SOCS7O14512 581 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 WNT7BP56706 349 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 TAS2R40P59535 323 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 MTMR2Q13614 643 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 LRRC14Q15048 493 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 DAB2IPQ5VWQ8 1189 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 FAM228AQ86W67 206 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 RHOT1Q8IXI2 618 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 NIM1KQ8IY84 436 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 WNK4Q96J92 1243 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 ATP6V0A4Q9HBG4 840 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 DNAJC17Q9NVM6 304 aaKnown RBP18.78■□□□□ 0.6
GYPC-202ENST00000356887 CTNNAL1Q9UBT7 734 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 THAP12O43422 761 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 MGRN1O60291 552 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 RGS20O76081 388 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 VNN1O95497 513 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 CFHP08603 1231 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 TNNI1P19237 187 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 DSG3P32926 999 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 ABCD1P33897 745 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 LIG4P49917 911 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 CXCL9Q07325 125 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 TRIM72Q6ZMU5 477 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 KATNAL2Q8IYT4 538 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 MAGEC3Q8TD91 643 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 MGARPQ8TDB4 240 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 DYDC1Q8WWB3 177 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 ATG4CQ96DT6 458 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 PWWP2AQ96N64 755 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 FNBP1Q96RU3 617 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 CXorf56Q9H5V9 222 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 MYOZ2Q9NPC6 264 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 SEPT9Q9UHD8 586 aaPredicted RBP18.78■□□□□ 0.6
GYPC-202ENST00000356887 LGALS13Q9UHV8 139 aa18.78■□□□□ 0.6
GYPC-202ENST00000356887 TPX2Q9ULW0 747 aaKnown RBP18.78■□□□□ 0.6
GYPC-202ENST00000356887 TCP11X1B4DZS4 312 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 PIK3CAP42336 1068 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 PRKCEQ02156 737 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 MAMLD1Q13495 774 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 SPOPLQ6IQ16 392 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 RELL1Q8IUW5 271 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 CCDC60Q8IWA6 550 aaPredicted RBP18.77■□□□□ 0.6
GYPC-202ENST00000356887 ABRAQ8N0Z2 381 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 BBOF1Q8ND07 529 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 CKAP2Q8WWK9 683 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 VCPIP1Q96JH7 1222 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 OSBPL8Q9BZF1 889 aa18.77■□□□□ 0.6
GYPC-202ENST00000356887 FHDC1Q9C0D6 1143 aaPredicted RBP18.77■□□□□ 0.6
GYPC-202ENST00000356887 NFASCO94856 1347 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 PTPRJQ12913 1337 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 FOXO6A8MYZ6 492 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 VPS41P49754 854 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 NLRP11P59045 1033 aaKnown RBP18.77■□□□□ 0.59
GYPC-202ENST00000356887 NOMO3P69849 1222 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 ELF3P78545 371 aaPredicted RBP18.77■□□□□ 0.59
GYPC-202ENST00000356887 CUL2Q13617 745 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 MPP2Q14168 576 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 PLEKHA7Q6IQ23 1121 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 ABHD15Q6UXT9 468 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 PHF13Q86YI8 300 aaPredicted RBP18.77■□□□□ 0.59
GYPC-202ENST00000356887 CYP4X1Q8N118 509 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.77■□□□□ 0.59
GYPC-202ENST00000356887 FAM212AQ96EL1 285 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 C11orf70Q9BRQ4 267 aa18.77■□□□□ 0.59
GYPC-202ENST00000356887 APOBEC3GQ9HC16 384 aaKnown RBP18.77■□□□□ 0.59
GYPC-202ENST00000356887 ADAM22Q9P0K1 906 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms