RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 DDX1Q92499 740 aaKnown RBP6.09□□□□□ -1.44
CD47-201ENST00000355354 CCDC127Q96BQ5 260 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 SMYD2Q9NRG4 433 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 SAR1BQ9Y6B6 198 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 HIVEP2P31629 2446 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 CSPP1Q1MSJ5 1256 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ZNF618Q5T7W0 954 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 CRELD2Q6UXH1 353 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 ABRAQ8N0Z2 381 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 CPXCR1Q8N123 301 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 EMC1Q8N766 993 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 RAPGEF5Q92565 580 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 P2RX5Q93086 422 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 GSDMAQ96QA5 445 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SYT15Q9BQS2 421 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ZNF214Q9UL59 606 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 ATP8A1Q9Y2Q0 1164 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 NID2Q14112 1375 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ARHGAP21Q5T5U3 1957 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ZNF865P0CJ78 1059 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 CCNHP51946 323 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 EPHB4P54760 987 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 DOC2BQ14184 412 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SLC1A5Q15758 541 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 KYNUQ16719 465 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SMTNL2Q2TAL5 461 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 GREB1Q4ZG55 1949 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 FAXCQ5TGI0 409 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 TMCO3Q6UWJ1 677 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 EPM2AIP1Q7L775 607 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 CABP7Q86V35 215 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 CCDC13Q8IYE1 715 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 TFAP2BQ92481 460 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SGCDQ92629 289 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 COPS5Q92905 334 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 TBC1D31Q96DN5 1066 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 LRCH3Q96II8 777 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 IFIH1Q9BYX4 1025 aaKnown RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 PORCNQ9H237 461 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ZNF408Q9H9D4 720 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ZFYVE28Q9HCC9 887 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 HDAC9Q9UKV0 1011 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 PAPLNO95428 1278 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 INHAP05111 366 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 BMP3P12645 472 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 RRM1P23921 792 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 GRK4P32298 578 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ANKRD1Q15327 319 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 WDR93Q6P2C0 686 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SECISBP2LQ93073 1101 aaKnown RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 TIGD1Q96MW7 591 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 EFCC1Q9HA90 598 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 MED12LQ86YW9 2145 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SPDYE3A6NKU9 549 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 SPDYE16A6NNV3 312 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 GOLGA8SH3BPF8 625 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 GOLGA8MH3BSY2 632 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 OR6B1O95007 311 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 NEK3P51956 506 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 BACE1P56817 501 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 MAGOHP61326 146 aaKnown RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 ZNF543Q08ER8 600 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 HERC4Q5GLZ8 1057 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 THEMIS2Q5TEJ8 643 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 CCNJLQ8IV13 435 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 CCDC50Q8IVM0 306 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 ST13P5Q8NFI4 369 aaPredicted RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 MAGOHBQ96A72 148 aaKnown RBP6.08□□□□□ -1.44
CD47-201ENST00000355354 TMEM87BQ96K49 555 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 MUC6Q6W4X9 2439 aa6.08□□□□□ -1.44
CD47-201ENST00000355354 FRMPD4Q14CM0 1322 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 RBM47A0AV96 593 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 TLDC2A0PJX2 215 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 KRT87PA6NCN2 255 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 TCP10L2B9ZVM9 353 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 MLYCDO95822 493 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 GNGT1P63211 74 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 MMRN1Q13201 1228 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 TAX1BP1Q86VP1 789 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 MLKLQ8NB16 471 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 TTC8Q8TAM2 541 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 PANX2Q96RD6 677 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 GTPBP4Q9BZE4 634 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 PHF24Q9UPV7 400 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 ANKRD36A6QL64 1941 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 TRIM43BA6NCK2 446 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 KCNK3O14649 394 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 CCDC175P0C221 793 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 HNRNPH3P31942 346 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 STAT6P42226 847 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 RAPGEF1Q13905 1077 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 CDC37Q16543 378 aaPredicted RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 ANKRD34AQ69YU3 496 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 ACTRT1Q8TDG2 376 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 TRIM43Q96BQ3 446 aaPredicted RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 NOC4LQ9BVI4 516 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 EURLQ9NYK6 297 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 ARMCX1Q9P291 453 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 WASF2Q9Y6W5 498 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms