RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PID1Q7Z2X4 250 aa10.27□□□□□ -0.77
GABPA-201ENST00000354828 ITIH5Q86UX2 942 aa10.27□□□□□ -0.77
GABPA-201ENST00000354828 RIN2Q8WYP3 895 aaPredicted RBP10.27□□□□□ -0.77
GABPA-201ENST00000354828 PBXIP1Q96AQ6 731 aa10.27□□□□□ -0.77
GABPA-201ENST00000354828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.27□□□□□ -0.77
GABPA-201ENST00000354828 HACD3Q9P035 362 aa10.27□□□□□ -0.77
GABPA-201ENST00000354828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.27□□□□□ -0.77
GABPA-201ENST00000354828 NRCAMQ92823 1304 aa10.27□□□□□ -0.77
GABPA-201ENST00000354828 ZFXP17010 805 aaPredicted RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 IFNAR2P48551 515 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 SLC11A2P49281 568 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 PRAMEP78395 509 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 NFE2Q16621 373 aaPredicted RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 MMS22LQ6ZRQ5 1243 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 FRA10AC1Q70Z53 315 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 OR6P1Q8NGX9 317 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 XYLBO75191 536 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 NSUN2Q08J23 767 aaKnown RBP eCLIP10.26□□□□□ -0.77
GABPA-201ENST00000354828 SLC27A1Q6PCB7 646 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 RHOT1Q8IXI2 618 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 ADSSL1Q8N142 457 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 FIBCD1Q8N539 461 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 SLC28A3Q9HAS3 691 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 AGPAT3Q9NRZ7 376 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 DDX56Q9NY93 547 aaKnown RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 TIMM13Q9Y5L4 95 aaPredicted RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 E5RI56 91 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 PPP1R12AO14974 1030 aaPredicted RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 TLL1O43897 1013 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 PALMO75781 387 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 DPYDQ12882 1025 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 GRB10Q13322 594 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 ARHGEF7Q14155 803 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 EFHC1Q5JVL4 640 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 GPAT2Q6NUI2 795 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 ACOT1Q86TX2 421 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 VSIG1Q86XK7 387 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 C7orf61Q8IZ16 206 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 AFAP1L1Q8TED9 768 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 PYROXD1Q8WU10 500 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 DCUN1D1Q96GG9 259 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 PURBQ96QR8 312 aaKnown RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 OLA1Q9NTK5 396 aaKnown RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 PPME1Q9Y570 386 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 AOC2O75106 756 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 TROVE2P10155 538 aaKnown RBP eCLIP10.26□□□□□ -0.77
GABPA-201ENST00000354828 GTF2H1P32780 548 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 GTF2H3Q13889 308 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 PPM1LQ5SGD2 360 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 CDKL3Q8IVW4 592 aaPredicted RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 CDY2AQ9Y6F7 541 aa10.26□□□□□ -0.77
GABPA-201ENST00000354828 AHDC1Q5TGY3 1603 aaPredicted RBP10.26□□□□□ -0.77
GABPA-201ENST00000354828 FAM86B1E9PN63 330 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 EBAG9O00559 213 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 FAM86B2P0C5J1 330 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 SMIM10L2AP0DMW4 78 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 SMIM10L2BP0DMW5 78 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 WEE1P30291 646 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 CLCN1P35523 988 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 ARL4DP49703 201 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 SLMAPQ14BN4 828 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 OVOS1Q6IE37 1185 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 KLC3Q6P597 504 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 NIPA1Q7RTP0 329 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 PPP1R13BQ96KQ4 1090 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 STK33Q9BYT3 514 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 FIS1Q9Y3D6 152 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 APOL1O14791 398 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 DNAJC6O75061 913 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 CXCL8P10145 99 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 LHX1P48742 406 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 KPNA1P52294 538 aaPredicted RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 DR1Q01658 176 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 ORC1Q13415 861 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 VSIG10LQ86VR7 867 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 CBWD2Q8IUF1 395 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 ATPAF2Q8N5M1 289 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 USP33Q8TEY7 942 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 GAS2L1Q99501 681 aaPredicted RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 MKNK1Q9BUB5 465 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 HIPK3Q9H422 1215 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 EPB41L5Q9HCM4 733 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 ABHD10Q9NUJ1 306 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 DNAJC17Q9NVM6 304 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 CTCFP49711 727 aaPredicted RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 PSMC6P62333 389 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 ASPHQ12797 758 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 CENPUQ71F23 418 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 ZC3H18Q86VM9 953 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 ZNF558Q96NG5 402 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 NDFIP2Q9NV92 336 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 AFF4Q9UHB7 1163 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 CDC23Q9UJX2 597 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 SALL3Q9BXA9 1300 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 UBA6A0AVT1 1052 aaPredicted RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 EEF2KO00418 725 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 BRD2P25440 801 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms