RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 KIAA1586Q9HCI6 787 aa16.93■□□□□ 0.3
NPHP3-201ENST00000337331 ZNF180Q9UJW8 692 aa16.93■□□□□ 0.3
NPHP3-201ENST00000337331 DAGLAQ9Y4D2 1042 aa16.93■□□□□ 0.3
NPHP3-201ENST00000337331 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
NPHP3-201ENST00000337331 RIMS1Q86UR5 1692 aaKnown RBP16.93■□□□□ 0.3
NPHP3-201ENST00000337331 RASA1P20936 1047 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 FITM2Q8N6M3 262 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 FAM13CQ8NE31 585 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 KIAA1683Q9H0B3 1180 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 GABBR1Q9UBS5 961 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 PALM3A6NDB9 673 aaPredicted RBP16.92■□□□□ 0.3
NPHP3-201ENST00000337331 H3BRJ5 948 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 KITP10721 976 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 SLC9A1P19634 815 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 TMPRSS15P98073 1019 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 MAPK6Q16659 721 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 EXOC8Q8IYI6 725 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 PLEKHG4BQ96PX9 1271 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 TRIM56Q9BRZ2 755 aaKnown RBP16.92■□□□□ 0.3
NPHP3-201ENST00000337331 PCSK1NQ9UHG2 260 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 BAZ2BQ9UIF8 2168 aaKnown RBP16.92■□□□□ 0.3
NPHP3-201ENST00000337331 FLT1P17948 1338 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 ADAMTS13Q76LX8 1427 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 PGM3O95394 542 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 PPIDQ08752 370 aaKnown RBP16.92■□□□□ 0.3
NPHP3-201ENST00000337331 SPP2Q13103 211 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 PPWD1Q96BP3 646 aaKnown RBP16.92■□□□□ 0.3
NPHP3-201ENST00000337331 RNF146Q9NTX7 359 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 R3HDM2Q9Y2K5 976 aaKnown RBP16.92■□□□□ 0.3
NPHP3-201ENST00000337331 SUGT1Q9Y2Z0 365 aa16.92■□□□□ 0.3
NPHP3-201ENST00000337331 ECE2O60344 883 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 PRPSAP1Q14558 356 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 FAF2Q96CS3 445 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 NSL1Q96IY1 281 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 TBC1D23Q9NUY8 699 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 HEY1Q9Y5J3 304 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 CDH16O75309 829 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 S100BP04271 92 aaPredicted RBP16.91■□□□□ 0.3
NPHP3-201ENST00000337331 SERPINB8P50452 374 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 BNIP1Q12981 228 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 CNGA2Q16280 664 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 JADE1Q6IE81 842 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 DPY19L2Q6NUT2 758 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 SWSAP1Q6NVH7 229 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 LRRC8BQ6P9F7 803 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 LENG1Q96BZ8 264 aaPredicted RBP16.91■□□□□ 0.3
NPHP3-201ENST00000337331 RMDN2Q96LZ7 410 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 SLC12A4Q9UP95 1085 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 GOLGA8RI6L899 631 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 CLPTM1O96005 669 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 NCF2P19878 526 aaPredicted RBP16.91■□□□□ 0.3
NPHP3-201ENST00000337331 CCNA1P78396 465 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 TBC1D25Q3MII6 688 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 FBXL13Q8NEE6 735 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 TRABDQ9H4I3 376 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 FIS1Q9Y3D6 152 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 PFASO15067 1338 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 SPATA31D1Q6ZQQ2 1576 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 FAM237AA0A1B0GTK4 181 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 COPEO14579 308 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 CYP26A1O43174 497 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 HNRNPCL1O60812 293 aaKnown RBP16.91■□□□□ 0.3
NPHP3-201ENST00000337331 TFDP2Q14188 446 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 EPHA7Q15375 998 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 ZFAND2BQ8WV99 257 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 PGM2Q96G03 612 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 REEP2Q9BRK0 252 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 UTP6Q9NYH9 597 aaKnown RBP16.91■□□□□ 0.3
NPHP3-201ENST00000337331 NDUFA13Q9P0J0 144 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 NKX1-2Q9UD57 310 aaPredicted RBP16.91■□□□□ 0.3
NPHP3-201ENST00000337331 ZMYND8Q9ULU4 1186 aaPredicted RBP16.91■□□□□ 0.3
NPHP3-201ENST00000337331 SH3GLB1Q9Y371 365 aa16.91■□□□□ 0.3
NPHP3-201ENST00000337331 RBM47A0AV96 593 aaKnown RBP16.9■□□□□ 0.3
NPHP3-201ENST00000337331 CDK17Q00537 523 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 CAV1Q03135 178 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 DCTN2Q13561 401 aaKnown RBP16.9■□□□□ 0.3
NPHP3-201ENST00000337331 C16orf72Q14CZ0 275 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 IYDQ6PHW0 289 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 AGPAT1Q99943 283 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 WNT8AQ9H1J5 351 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 SPDYE16A6NNV3 312 aaPredicted RBP16.9■□□□□ 0.3
NPHP3-201ENST00000337331 ADRA2BP18089 450 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 GPS1Q13098 491 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 CNGA3Q16281 694 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 SNRNP48Q6IEG0 339 aaKnown RBP16.9■□□□□ 0.3
NPHP3-201ENST00000337331 TTI2Q6NXR4 508 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 ATXN2LQ8WWM7 1075 aaKnown RBP16.9■□□□□ 0.3
NPHP3-201ENST00000337331 ZNF668Q96K58 619 aaPredicted RBP16.9■□□□□ 0.3
NPHP3-201ENST00000337331 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 C5orf60A6NFR6 353 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 SPOPLQ6IQ16 392 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 RBM12BQ8IXT5 1001 aaKnown RBP16.9■□□□□ 0.3
NPHP3-201ENST00000337331 TTC13Q8NBP0 860 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 OR6B3Q8NGW1 331 aa16.9■□□□□ 0.3
NPHP3-201ENST00000337331 NSUN6Q8TEA1 469 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms