RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 KLHL38Q2WGJ6 581 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 SH3GL3Q99963 347 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 SALL4Q9UJQ4 1053 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 SHBGP04278 402 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 NR3C2P08235 984 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 PTENP60484 403 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 NFX1Q12986 1120 aaKnown RBP17.32■□□□□ 0.36
SFXN1-201ENST00000321442 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 BAP1Q92560 729 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 CENPKQ9BS16 269 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 THTPAQ9BU02 230 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 TSSK1BQ9BXA7 367 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 INPP5FQ9Y2H2 1132 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 PPFIA2O75334 1257 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 UBTFL6P0CB48 400 aaPredicted RBP17.32■□□□□ 0.36
SFXN1-201ENST00000321442 ALDH18A1P54886 795 aaKnown RBP17.32■□□□□ 0.36
SFXN1-201ENST00000321442 HEXIM2Q96MH2 286 aaKnown RBP17.32■□□□□ 0.36
SFXN1-201ENST00000321442 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
SFXN1-201ENST00000321442 ACAD9Q9H845 621 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 PCDHGC5Q9Y5F6 944 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 ZBTB39O15060 712 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 PGK2P07205 417 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 ARP10275 920 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 RANBP1P43487 201 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 CCNA1P78396 465 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 C3orf62Q6ZUJ4 267 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 NT5DC3Q86UY8 548 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 C3orf20Q8ND61 904 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 VPS11Q9H270 941 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 ROBO1Q9Y6N7 1651 aa17.32■□□□□ 0.36
SFXN1-201ENST00000321442 TMEM150BA6NC51 233 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 B2RBV5 119 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 MSH4O15457 936 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 PEX10O60683 326 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 KRT38O76015 456 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 KCNA3P22001 575 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 RPL21P46778 160 aaKnown RBP17.31■□□□□ 0.36
SFXN1-201ENST00000321442 MIS18BP1Q6P0N0 1132 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 TMEM143Q96AN5 459 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 PHTF1Q9UMS5 762 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
SFXN1-201ENST00000321442 CTCFP49711 727 aaPredicted RBP17.31■□□□□ 0.36
SFXN1-201ENST00000321442 KRT80Q6KB66 452 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 CBWD1Q9BRT8 395 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 CHMP2BQ9UQN3 213 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 CCDC22O60826 627 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 GSTA1P08263 222 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 GSTA2P09210 222 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 IRX1P78414 480 aaPredicted RBP17.31■□□□□ 0.36
SFXN1-201ENST00000321442 RASSF3Q86WH2 238 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 AFAP1L2Q8N4X5 818 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 SERPINB12Q96P63 405 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 TEX13BQ9BXU2 312 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 PFDN4Q9NQP4 134 aa17.31■□□□□ 0.36
SFXN1-201ENST00000321442 GIPC1O14908 333 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 PSAPP07602 524 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 KRT10P13645 584 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 KRT4P19013 534 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SERPINB4P48594 390 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 PSMC1P62191 440 aaKnown RBP17.3■□□□□ 0.36
SFXN1-201ENST00000321442 KAT2BQ92831 832 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 ANKRD36BP1Q96IX9 119 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 LRGUKQ96M69 825 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
SFXN1-201ENST00000321442 PIK3R2O00459 728 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 ITIH4Q14624 930 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 LRRC55Q6ZSA7 311 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SPIRE2Q8WWL2 714 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 KRT35Q92764 455 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SLC35C1Q96A29 364 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 ARHGEF26Q96DR7 871 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SHCBP1LQ9BZQ2 653 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 GPRC5CQ9NQ84 441 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 METTL5Q9NRN9 209 aaKnown RBP17.3■□□□□ 0.36
SFXN1-201ENST00000321442 KCNH7Q9NS40 1196 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 DONSONQ9NYP3 566 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SENP1Q9P0U3 644 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 USP20Q9Y2K6 914 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 FLT3P36888 993 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
SFXN1-201ENST00000321442 AP2B1P63010 937 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 FUT2Q10981 343 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 ART3Q13508 389 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 QPCTQ16769 361 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SMTNL2Q2TAL5 461 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 APTXQ7Z2E3 356 aaKnown RBP17.3■□□□□ 0.36
SFXN1-201ENST00000321442 SLC5A5Q92911 643 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
SFXN1-201ENST00000321442 TMEM237Q96Q45 408 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 TUFT1Q9NNX1 390 aa17.3■□□□□ 0.36
SFXN1-201ENST00000321442 ALDH5A1P51649 535 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-201ENST00000321442 CASP5P51878 434 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 EP400NLQ6ZTU2 488 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 TRIML2Q8N7C3 387 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 C2orf69Q8N8R5 385 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 TATDN2Q93075 761 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 ACAP3Q96P50 834 aa17.29■□□□□ 0.36
SFXN1-201ENST00000321442 TRIM56Q9BRZ2 755 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms