RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 HIF1AQ16665 826 aa17.51■□□□□ 0.39
PACS1-201ENST00000320580 RFWD3Q6PCD5 774 aa17.51■□□□□ 0.39
PACS1-201ENST00000320580 SLC30A5Q8TAD4 765 aa17.51■□□□□ 0.39
PACS1-201ENST00000320580 EFHD1Q9BUP0 239 aa17.51■□□□□ 0.39
PACS1-201ENST00000320580 HEG1Q9ULI3 1381 aa17.51■□□□□ 0.39
PACS1-201ENST00000320580 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 LCA5LO95447 670 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 TUBP50607 506 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 EFHC1Q5JVL4 640 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 PPP2R5DQ14738 602 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 EDRF1Q3B7T1 1238 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 EME1Q96AY2 570 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 NR2E1Q9Y466 385 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 LPCAT2Q7L5N7 544 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 GLIS3Q8NEA6 775 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 CATSPER1Q8NEC5 780 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 OR6Y1Q8NGX8 325 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 DGCR14Q96DF8 476 aaKnown RBP17.5■□□□□ 0.39
PACS1-201ENST00000320580 MTFR1LQ9H019 292 aa17.5■□□□□ 0.39
PACS1-201ENST00000320580 UTP6Q9NYH9 597 aaKnown RBP17.5■□□□□ 0.39
PACS1-201ENST00000320580 OCA2Q04671 838 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 KRT35Q92764 455 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 ALKBH8Q96BT7 664 aaKnown RBP17.49■□□□□ 0.39
PACS1-201ENST00000320580 TIPINQ9BVW5 301 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 GLT8D2Q9H1C3 349 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 C1orf112Q9NSG2 853 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 STX18Q9P2W9 335 aaKnown RBP17.49■□□□□ 0.39
PACS1-201ENST00000320580 WARS2Q9UGM6 360 aaKnown RBP17.49■□□□□ 0.39
PACS1-201ENST00000320580 CHKBQ9Y259 395 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 GAP43P17677 238 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 CD58P19256 250 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 POLD1P28340 1107 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 PDK3Q15120 406 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 SEC23AQ15436 765 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 SMIM5Q71RC9 77 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 NLRP10Q86W26 655 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 TMEM47Q9BQJ4 181 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 WASF2Q9Y6W5 498 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 PI4K2BG5E9Z4 385 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 GSC2O15499 205 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 KRT75O95678 551 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 HLA-DOAP06340 250 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 ADRA1DP25100 572 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 STAT3P40763 770 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 CHN2P52757 468 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 OCRLQ01968 901 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 TRIM16LQ309B1 348 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 SETDB2Q96T68 719 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 KLHL11Q9NVR0 708 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 NUB1Q9Y5A7 615 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 MEGF6O75095 1541 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 H7C0C1 242 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 FOXP2O15409 715 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 CCDC166P0CW27 439 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 PYGMP11217 842 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 RPA3P35244 121 aaPredicted RBP17.49■□□□□ 0.39
PACS1-201ENST00000320580 RPL5P46777 297 aaKnown RBP17.49■□□□□ 0.39
PACS1-201ENST00000320580 ATP5OP48047 213 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 YARSP54577 528 aaKnown RBP17.49■□□□□ 0.39
PACS1-201ENST00000320580 CCDC15Q0P6D6 951 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 UBAP1Q9NZ09 502 aa17.49■□□□□ 0.39
PACS1-201ENST00000320580 TMA7Q9Y2S6 64 aaKnown RBP17.49■□□□□ 0.39
PACS1-201ENST00000320580 DRG2P55039 364 aaKnown RBP17.48■□□□□ 0.39
PACS1-201ENST00000320580 RIPOR1Q6ZS17 1223 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 C3orf62Q6ZUJ4 267 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 PRELID2Q8N945 189 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 UNC45AQ9H3U1 944 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 ARL8BQ9NVJ2 186 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 GID8Q9NWU2 228 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 PDXKO00764 312 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 TNNI1P19237 187 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 CIITAP33076 1130 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 GRM4Q14833 912 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 TRIM50Q86XT4 487 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 TUBGCP5Q96RT8 1024 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
PACS1-201ENST00000320580 CCDC134Q9H6E4 229 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 PARVGQ9HBI0 331 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 FBXO6Q9NRD1 293 aaPredicted RBP17.48■□□□□ 0.39
PACS1-201ENST00000320580 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
PACS1-201ENST00000320580 APEX2Q9UBZ4 518 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 TDRKHQ9Y2W6 561 aaKnown RBP17.48■□□□□ 0.39
PACS1-201ENST00000320580 PXDNQ92626 1479 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 OCM2P0CE71 109 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 OCMP0CE72 109 aaPredicted RBP17.48■□□□□ 0.39
PACS1-201ENST00000320580 ARHGEF26Q96DR7 871 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 PWWP2AQ96N64 755 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 KCNK16Q96T55 309 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 DOLKQ9UPQ8 538 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 STK24Q9Y6E0 443 aa17.48■□□□□ 0.39
PACS1-201ENST00000320580 MEI4A8MW99 385 aa17.47■□□□□ 0.39
PACS1-201ENST00000320580 CYP26A1O43174 497 aa17.47■□□□□ 0.39
PACS1-201ENST00000320580 BGNP21810 368 aa17.47■□□□□ 0.39
PACS1-201ENST00000320580 FMO5P49326 533 aa17.47■□□□□ 0.39
PACS1-201ENST00000320580 KLRC3Q07444 240 aa17.47■□□□□ 0.39
PACS1-201ENST00000320580 TBC1D25Q3MII6 688 aa17.47■□□□□ 0.39
PACS1-201ENST00000320580 TAGLN3Q9UI15 199 aa17.47■□□□□ 0.39
PACS1-201ENST00000320580 MYH8P13535 1937 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms