RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 KLHDC7AQ5VTJ3 777 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 KDELC2Q7Z4H8 507 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 TMA16Q96EY4 203 aaKnown RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 LRFN2Q9ULH4 789 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 PLAGL2Q9UPG8 496 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 MOCS2O96007 188 aaPredicted RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 FAM200BP0CF97 657 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 C3orf62Q6ZUJ4 267 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 PODNQ7Z5L7 613 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 BEST2Q8NFU1 509 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 SNX19Q92543 992 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 MCEEQ96PE7 176 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 QTRT2Q9H974 415 aaKnown RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 DDX28Q9NUL7 540 aaKnown RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 ZBTB24O43167 697 aaPredicted RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 CAVIN3Q969G5 261 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 A0A087X0T9 212 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 FAM228BP0C875 321 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 KRT4P19013 534 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 IL10P22301 178 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 SKOR1P84550 965 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 ZNF200P98182 395 aaPredicted RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 RCN1Q15293 331 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 SNRNP35Q16560 246 aaKnown RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 ITPRIPL1Q6GPH6 555 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 TWF2Q6IBS0 349 aaKnown RBP17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 MAGEB5Q9BZ81 275 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 ZNF229Q9UJW7 825 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 SLC13A4Q9UKG4 626 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 CNTNAP5Q8WYK1 1306 aa17.29■□□□□ 0.36
SH3RF1-201ENST00000284637 DEAF1O75398 565 aaPredicted RBP17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 PRLRP16471 622 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 KCNA4P22459 653 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 CIITAP33076 1130 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 PTK7Q13308 1070 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 ASCC2Q9H1I8 757 aaPredicted RBP17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 DMGDHQ9UI17 866 aaKnown RBP17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 UBA6A0AVT1 1052 aaPredicted RBP17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 O00370 1275 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 ECE2O60344 883 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 DAB1O75553 588 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 TRPC1P48995 793 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 E2F8A0AVK6 867 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 SZRD1Q7Z422 152 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 LACRTQ9GZZ8 138 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 LOC100653049A0A140TA62 436 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 KRT34O76011 436 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 LCP1P13796 627 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 PDGFRAP16234 1089 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 PECAM1P16284 738 aaPredicted RBP17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 ROR2Q01974 943 aaKnown RBP17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 EZH2Q15910 746 aaKnown RBP17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 SIKE1Q9BRV8 207 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
SH3RF1-201ENST00000284637 DSG1Q02413 1049 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 CATSPER2Q96P56 530 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 C2orf40Q9H1Z8 148 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 HOXC10Q9NYD6 342 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 ZCCHC18P0CG32 403 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 COL23A1Q86Y22 540 aaPredicted RBP17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 ZNF507Q8TCN5 953 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 ZNF483Q8TF39 744 aaPredicted RBP17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 ZC3H15Q8WU90 426 aaKnown RBP17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 AIM2O14862 343 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 ELOA2Q8IYF1 753 aaPredicted RBP17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 GALNT4Q8N4A0 578 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 EME1Q96AY2 570 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 WRNIP1Q96S55 665 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 FAM129AQ9BZQ8 928 aa17.27■□□□□ 0.36
SH3RF1-201ENST00000284637 KRT8P05787 483 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 RGS7P49802 495 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 CACNA2D1P54289 1103 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 LBRQ14739 615 aaKnown RBP17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 MAPRE2Q15555 327 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 RNF149Q8NC42 400 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 RBBP8NLQ8NC74 664 aaPredicted RBP17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 UBOX5O94941 541 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 TARSP26639 723 aaKnown RBP17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 FLOT2Q14254 428 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 DNAJC7Q99615 494 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 PLA2G12BQ9BX93 195 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 LRCH1Q9Y2L9 728 aa17.27■□□□□ 0.35
SH3RF1-201ENST00000284637 CDC42BPGQ6DT37 1551 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 E5RI56 91 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 APOA1P02647 267 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 WEE2P0C1S8 567 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 TCN1P20061 433 aaPredicted RBP17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 COILP38432 576 aaPredicted RBP17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 DDR1Q08345 913 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 CCDC134Q9H6E4 229 aa17.26■□□□□ 0.35
SH3RF1-201ENST00000284637 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms